Trends in the development of discriminating between Angelica L. species using advanced DNA barcoding techniques

Q3 Agricultural and Biological Sciences
Shin-Woo Lee, Yong-wook Shin, Yun-Hee Kim
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引用次数: 0

Abstract

We reviewed current research trends for discriminating between species of the Angelica genus, a group of important medicinal plants registered in South Korea, China, and Japan. Since the registered species for medicinal purposes differ by country, they are often adulterated as well as mixed in commercial markets. Several DNA technologies have been applied to distinguish between species. However, one of the restrictions is insufficient single-nucleotide pol-ymorphisms (SNPs) within the target DNA fragments; in particular, among closely-related species. Recently, amplification refractory mutation system (ARMS)-PCR and high-resolution melting (HRM) curve analysis techniques have been developed to solve such a problem. We applied both technologies, and found they were able to discriminate several lines of Angelica genus, including A. gigas Nakai, A. gigas Jiri, A. sinensis , A. acutiloba Kitag, and Levisticum officinale . Furthermore, although the ITS region differs only by one SNP between A. gigas Nakai and A. gigas Jiri, both HRM and ARMS-PCR techniques were powerful enough to discriminate between them. Since both A. gigas Nakai and A. gigas Jiri are native species to South Korea and are very closely related, they are difficult to discriminate by their morphological characteristics. For practical applications of these technologies, further research is necessary with various materials, such as dried or processed materials (jam, jelly, juice, medicinal decoctions, etc.) in commercial markets.
利用先进的DNA条形码技术鉴别当归品种的发展趋势
综述了目前在韩国、中国和日本注册的一组重要药用植物当归属的物种鉴别研究进展。由于注册的药用物种因国家而异,它们经常在商业市场上掺假和混合。几种DNA技术已被用于区分物种。然而,限制之一是靶DNA片段内的单核苷酸多态性(SNPs)不足;尤其是在亲缘关系密切的物种中。近年来,为了解决这一问题,人们开发了扩增难治性突变系统(ARMS)-PCR和高分辨率熔解曲线分析技术。我们应用了这两种技术,发现它们能够区分当归属的几个品系,包括A.gigas Nakai、A.gigas Jiri、A.sinensis、A.acutiloba Kitag和Levisticum officinale。此外,尽管A.gigas Nakai和A.gigas Jiri之间的ITS区域仅相差一个SNP,但HRM和ARMS-PCR技术都足以区分它们。由于Nakai和Jiri都是韩国本土物种,亲缘关系非常密切,因此很难通过它们的形态特征进行区分。为了这些技术的实际应用,有必要对各种材料进行进一步的研究,例如商业市场上的干燥或加工材料(果酱、果冻、果汁、煎剂等)。
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来源期刊
Journal of Plant Biotechnology
Journal of Plant Biotechnology Agricultural and Biological Sciences-Agronomy and Crop Science
CiteScore
1.20
自引率
0.00%
发文量
32
期刊介绍: Journal of Plant Biotechnology (JPB) is an international open access journal published four issues of a yearly volume on March 31, June 30, September 30, and December 31 by The Korean Society for Plant Biotechnology (KSPBT) founded in 1973. JPB publishes original, peer-reviewed articles dealing with advanced scientific aspects of plant biotechnology, which includes molecular biology, genetics, genomics, proteomics, and metabolomics. JPB does not exclude studies on lower plants including algae and cyanobacteria if studies are carried out within the aspects described above.
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