Issue Information

Q1 Biochemistry, Genetics and Molecular Biology
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引用次数: 0

Abstract

Cover: In An and Lee et al. (http://doi.org/10.1002/cpps.92), the image shows the overall fold, Cβ-strip, and the 2D map of a β-barrel. (A) The cartoon representation of a β-barrel. The backbones are shown in sticks. The carbon, nitrogen, and oxygen atoms are colored in white, blue, and red, respectively. The side chains and hydrogen atoms are omitted for clarity. The backbone hydrogen bonds between strands are shown in yellow dashed lines. (B) A Cβ-strip is shown in sticks and cartoon representation in orange. The carbon, nitrogen, oxygen, and hydrogen atoms are colored in orange, blue, red, and white, respectively. (C) The 2D map of the β-barrel used in this article is shown in cartoon representation. Each circle represents a β-barrel residue. The strand residues are colored in white or gray, and the loop residues are colored in blue. An individual Cβ-strip is distinguished by gray or white color. One exemplary Cβ-strip is marked out with a gray dashed line. The last strand is also shown in dashed circles to show its complete hydrogen bond registry to the first strand. The N or C terminus of the protein is marked out by ‘N’ or ‘C’. The shear number (S) and strand distance (D) are marked out. Some of the N and C terminal residues in the actual blueprint file used in the article are omitted for clarity. Panels (A and B) are prepared using PyMOL (The PyMOL Molecular Graphics System, Schrödinger, LLC).

Abstract Image

问题信息
封面:在An and Lee et al. (http://doi.org/10.1002/cpps.92)中,图像显示了整个褶皱、c β条和β桶的二维图。(A) β桶的卡通形象。脊柱以棒状显示。碳原子、氮原子和氧原子分别用白色、蓝色和红色表示。为清楚起见,省略了侧链和氢原子。链间的主氢键用黄色虚线表示。(B) c β条以棒状和橙色卡通表示。碳原子、氮原子、氧原子和氢原子分别用橙色、蓝色、红色和白色表示。(C)本文中使用的β-桶的二维地图以卡通表示。每个圆圈代表一个β桶残留物。链残基呈白色或灰色,环残基呈蓝色。单个c β条带以灰色或白色区分。一个典型的c β带用灰色虚线标出。最后一条链也用虚线圈表示,以显示其与第一条链的完整氢键注册表。蛋白质的N或C端用“N”或“C”标记出来。剪切数(S)和股线距离(D)被标注出来。为清晰起见,本文实际使用的蓝图文件中,部分N、C端残基被省略。面板(A和B)使用PyMOL (The PyMOL Molecular Graphics System, Schrödinger, LLC)制备。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Current Protocols in Protein Science
Current Protocols in Protein Science Biochemistry, Genetics and Molecular Biology-Biochemistry
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期刊介绍: With the mapping of the human genome, more and more researchers are exploring protein structures and functions in living organisms. Current Protocols in Protein Science provides protein scientists, biochemists, molecular biologists, geneticists, and others with the first comprehensive suite of protocols for this growing field.
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