Operationalizing expert knowledge in species' range estimates using diverse data types

Q2 Agricultural and Biological Sciences
C. Merow, Peter J. Galante, J. Kass, Matthew E. Aiello‐Lammens, Cecina Babich Morrow, B. Gerstner, Valentina Grisales Betancur, Alex C. Moore, E. Noguera-Urbano, G. Pinilla‐Buitrago, R. Anderson, M. Blair
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引用次数: 8

Abstract

for poorly sampled species, estimate biodiversity, and inform conservation decisions. Abstract Estimates of species’ ranges can inform many aspects of biodiversity research and conservation‐management decisions. Many practical applications need high‐precision range estimates that are sufficiently reliable to use as input data in downstream applications. One solution has involved expert‐generated maps that reflect on‐the‐ground field information and implicitly capture various processes that may limit a species’ geographic distribution. However, expert maps are often subjective and rarely reproducible. In contrast, species distribution models (SDMs) typically have finer resolution and are reproducible because of explicit links to data. Yet, SDMs can have higher uncertainty when data are sparse, which is an issue for most species. Also, SDMs often capture only a subset of the factors that determine species distributions (e.g., climate) and hence can require significant post‐ processing to better estimate species’ current realized distributions. Here, we demonstrate how expert knowledge, diverse data types, and SDMs can be used together in a transparent and reproducible modeling workflow. Specifically, we show how expert knowledge regarding species’ habitat use, elevation, biotic interactions, and environmental tolerances can be used to make and refine range estimates using SDMs and various data sources, including high‐resolution remotely sensed products. This range‐refinement approach is primed to use various data sources, including many with continuously improving spatial or temporal resolution. To facilitate such analyses, we compile a comprehensive suite of tools in a new R package, maskRangeR, and provide worked examples. These tools can facilitate a wide variety of basic and applied research that requires high‐resolution maps of species’ current
运用不同数据类型对物种范围估计的专家知识进行操作
对于采样不足的物种,估计生物多样性,并为保护决策提供信息。摘要对物种范围的估计可以为生物多样性研究和保护管理决策的许多方面提供信息。许多实际应用需要足够可靠的高精度范围估计,以便在下游应用中用作输入数据。一种解决方案涉及专家生成的地图,这些地图反映了实地信息,并隐含地捕捉了可能限制物种地理分布的各种过程。然而,专家地图往往是主观的,很少可复制。相比之下,物种分布模型(SDM)通常具有更高的分辨率,并且由于与数据的明确联系而具有可重复性。然而,当数据稀少时,SDM可能具有更高的不确定性,这对大多数物种来说都是一个问题。此外,SDM通常只捕获决定物种分布(如气候)的因素的一个子集,因此可能需要进行大量的后处理,以更好地估计物种当前实现的分布。在这里,我们展示了如何在透明和可复制的建模工作流中一起使用专家知识、不同的数据类型和SDM。具体而言,我们展示了如何使用SDM和各种数据源(包括高分辨率遥感产品),利用有关物种栖息地使用、海拔、生物相互作用和环境耐受性的专家知识来进行和完善范围估计。这种范围细化方法可以使用各种数据源,包括许多具有不断提高的空间或时间分辨率的数据源。为了便于进行此类分析,我们在一个新的R包maskRangeR中编译了一套全面的工具,并提供了工作示例。这些工具可以促进各种基础和应用研究,这些研究需要高分辨率的物种电流图
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来源期刊
Frontiers of Biogeography
Frontiers of Biogeography Environmental Science-Ecology
CiteScore
4.30
自引率
0.00%
发文量
34
审稿时长
6 weeks
期刊介绍: Frontiers of Biogeography is the scientific magazine of the International Biogeography Society (http://www.biogeography.org/). Our scope includes news, original research letters, reviews, opinions and perspectives, news, commentaries, interviews, and articles on how to teach, disseminate and/or apply biogeographical knowledge. We accept papers on the study of the geographical variations of life at all levels of organization, including also studies on temporal and/or evolutionary variations in any component of biodiversity if they have a geographical perspective, as well as studies at relatively small scales if they have a spatially explicit component.
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