A COMBINED APPROACH OF MULTIPLE CORRESPONDENCE ANALYSIS AND HIERARCHICAL CLUSTER ANALYSIS FOR PROFILING RELATIONSHIPS AMONG CATEGORICAL RISK PREDICTORS: A BLUETONGUE CASE STUDY

IF 0.3 4区 农林科学 Q4 VETERINARY SCIENCES
I. El-Araby, S. Moawed, F. M. Hassan, H. Gouda
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引用次数: 0

Abstract

Bluetongue (BT) is a non-contagious virus in the Reoviridae family that infects both wild and domestic animals. It causes economic losses and reduces infected animals' production and reproduction. A total of 233 apparently healthy animals were screened for BT. Profiles of health condition of animals were identified using multiple correspondence analysis (MCA) and hierarchical cluster analysis (HCA), and the impact of the change in disease condition of animals was explored by examining the subjective evaluation of the impact of risk factors like (age, sex, season, species, and locality) with regard to BT disease providing an insight into a dataset through information visualization and it presents a useful application for visualizing associations amongst variable categories. The first two MCA dimensions retained up to 27% of the total inertia contained in the data. The positive BT results, summer, and old animals categories were loaded in the first dimension, while negative cases, Al-mounfia and winter categories were related to the second dimension. HCA identified three clusters. Cluster 1 was characterized by frequent and largely exclusive seronegative BT animals 91.67 % of animals in the cluster were seronegative, negative BTV category is the most important and related to cluster 1 with positive v-test=8.75.  Cluster 3 can named a cluster of seropositive BT, up to 88% of cases were seropositive. We can conclude that seropositive BT is associated with summer and old age categories, whereas seronegative BT is associated with young age and winter categories, and thus MCA and HCA provide convenient and easy-to-interpret analytical tools for assessing categorical data relationships.
多重对应分析与层次聚类分析相结合的方法在分类风险预测因子间的关系分析:蓝舌病个案研究
蓝舌病毒(BT)是呼肠孤病毒科的一种非传染性病毒,可感染野生动物和家畜。它会造成经济损失,并减少受感染动物的生产和繁殖。共筛选233只明显健康的动物进行BT筛查。使用多重对应分析(MCA)和层次聚类分析(HCA)鉴定动物的健康状况,通过检查风险因素(如年龄、性别、季节、物种和地点)对BT疾病影响的主观评估,探索了动物疾病状况变化的影响,通过信息可视化提供了对数据集的深入了解,并为可视化变量类别之间的关联提供了有用的应用。前两个MCA尺寸保留了数据中包含的总惯性的27%。阳性BT结果、夏季和老年动物类别加载在第一维度,而阴性病例、Al mounfia和冬季类别与第二维度相关。HCA确定了三个集群。集群1的特点是频繁且主要是排他性的血清阴性BT动物。集群中91.67%的动物是血清阴性的,阴性BTV类别是最重要的,与集群1相关,阳性v测试=8.75。集群3可以命名为血清阳性BT集群,高达88%的病例是血清阳性。我们可以得出结论,血清阳性BT与夏季和老年类别相关,而血清阴性BT与年轻和冬季类别相关,因此MCA和HCA为评估分类数据关系提供了方便和易于解释的分析工具。
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来源期刊
Slovenian Veterinary Research
Slovenian Veterinary Research VETERINARY SCIENCES-
CiteScore
0.60
自引率
0.00%
发文量
12
审稿时长
>12 weeks
期刊介绍: SLOVENIAN VETERINARY RESEARCH (ISSN 1580-4003) publishes original articles, which report the results of original research in most areas of biomedicine. The journal also publishes review articles dealing with rapidly developing areas of biomedicine or which update understanding of classical fields of biomedicine, as well as case reports, shorter scientific contributions, letters to the editor, etc.; which have not been published or are under consideration for publication elsewhere. Only papers written in English can be considered.
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