SIMPLEKS DAN MULTIPLEKS PRE-ENRICHMENT-PCR UNTUK DETEKSI Salmonella Enteritidis DAN Typhimurium PADA KARKAS AYAM

Siti Nurjanah, W. Rahayu, R. Dewanti-Hariyadi, Ni Gusti Ayu Made Widyatari Asthiti, Rahadina Praba Melati
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Abstract

A PCR assay has been developed and applied to detect Salmonella contamination in chicken carcasses. However, a concentration fewer than 3 cells per gram lead to false-negative results due to difficulties in the DNA extraction. The objective of this study was to evaluate of the influence of pre-enrichment on the sensitivity of simplex and multiplex PCR methods the detection of for Salmonella spp., S. Enteritidis and S. Typhimurium in chicken carcasses. Artificial contamination was done using very low number of Salmonella Hadar, S. Enteritidis dan S. Typhimurium and pre-enrichment was carried out by 8 hours incubation in non-selective (BPW) medium. The results showed that simplex PCR could detect Salmonella spp., S. Enteritidis and S. Typhimurium at initial numbers of 2.3, 0.9 and 2.3 MPN/mL of cells in broth medium, respectively. A multiplex PCR could detect mixed culture of the three Salmonella serovars at an initial number of 0.73 MPN/mL of cells. When compared to non-enrichment treatment, simplex pre-enrichment-PCR gave an increase in the percentage of positive results in chicken carcasses (n= 12), from 75 to 100% for Salmonella spp., from 8 to 58% for S. Typhimurium, and from 58 to 75% for S. Enteritidis. Increasing in the positive percentage was also occurred at multiplex pre-enrichment-PCR, however the concentration of S. Enteritidis primer was not optimum for detection. Pre-enrichment step significantly increases the sensitivity of PCR-based assay for detection Salmonella.
已经开发了一种PCR检测方法,并将其应用于检测鸡胴体中的沙门氏菌污染。然而,由于DNA提取的困难,每克少于3个细胞的浓度导致假阴性结果。本研究的目的是评估预富集对单一和多重PCR方法检测鸡胴体中沙门氏菌、肠炎沙门氏菌和鼠伤寒沙门氏菌灵敏度的影响。人工污染是使用非常低数量的哈达尔沙门氏菌、肠炎沙门氏菌和鼠伤寒沙门氏菌进行的,并通过在非选择性(BPW)培养基中培养8小时进行预富集。结果表明,在肉汤培养基中,初始细胞数分别为2.3、0.9和2.3MPN/mL时,单纯形PCR可检测沙门氏菌、肠炎沙门氏菌和鼠伤寒沙门氏菌。多重PCR可以检测三种沙门氏菌血清型的混合培养,初始细胞数为0.73MPN/mL。与非富集处理相比,单纯预富集PCR使鸡胴体(n=12)的阳性结果百分比增加,沙门氏菌从75%增加到100%,鼠伤寒沙门氏菌由8%增加到58%,肠炎沙门氏菌则从58%增加到75%。多重预富集PCR的阳性率也有所增加,但肠炎沙门氏菌引物的浓度不是检测的最佳浓度。预富集步骤显著提高了基于PCR的检测沙门氏菌的灵敏度。
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