A DNA barcode library for ground beetles of Germany: the genus Agonum Bonelli, 1810 (Insecta, Coleoptera, Carabidae)

IF 1.3 3区农林科学 Q2 ENTOMOLOGY

Deutsche Entomologische Zeitschrift Pub Date : 2020-10-19 DOI:10.3897/dez.67.56163

M. Raupach, K. Hannig, J. Morinière, L. Hendrich

{"title":"A DNA barcode library for ground beetles of Germany: the genus Agonum Bonelli, 1810 (Insecta, Coleoptera, Carabidae)","authors":"M. Raupach, K. Hannig, J. Morinière, L. Hendrich","doi":"10.3897/dez.67.56163","DOIUrl":null,"url":null,"abstract":"The ground beetle genusAgonumBonelli, 1810 is a large genus of the tribe Platynini with many species that show high amounts of intraspecific variations, making a correct identification challenging. As part of the German Barcode of Life initiative, this publication provides a comprehensive DNA barcode library for species ofAgonumthat are reported for Germany. In total, DNA barcodes from 258 beetles and 23 species were analysed using the Barcode of Life Data System (BOLD) workbench, including sequences from former studies and 68 newly-generated sequences. The neighbour-joining analyses, based on K2P distances, revealed distinct clustering for all studied species, with unique Barcode Index Numbers (BINs) for 15 species (65%). BIN sharing but distinct clustering was found for three species pairs:Agonum micans/Agonum scitulum,Agonum impressum/Agonum sexpunctatumandAgonum duftschmidi/Agonum emarginatum. The given dataset and its analysis represent another important step in generating a comprehensive DNA barcode library for the ground beetles of Germany and Central Europe in terms of modern biodiversity research.","PeriodicalId":50592,"journal":{"name":"Deutsche Entomologische Zeitschrift","volume":"1 1","pages":""},"PeriodicalIF":1.3000,"publicationDate":"2020-10-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"4","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Deutsche Entomologische Zeitschrift","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.3897/dez.67.56163","RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENTOMOLOGY","Score":null,"Total":0}

引用次数: 4

Abstract

The ground beetle genusAgonumBonelli, 1810 is a large genus of the tribe Platynini with many species that show high amounts of intraspecific variations, making a correct identification challenging. As part of the German Barcode of Life initiative, this publication provides a comprehensive DNA barcode library for species ofAgonumthat are reported for Germany. In total, DNA barcodes from 258 beetles and 23 species were analysed using the Barcode of Life Data System (BOLD) workbench, including sequences from former studies and 68 newly-generated sequences. The neighbour-joining analyses, based on K2P distances, revealed distinct clustering for all studied species, with unique Barcode Index Numbers (BINs) for 15 species (65%). BIN sharing but distinct clustering was found for three species pairs:Agonum micans/Agonum scitulum,Agonum impressum/Agonum sexpunctatumandAgonum duftschmidi/Agonum emarginatum. The given dataset and its analysis represent another important step in generating a comprehensive DNA barcode library for the ground beetles of Germany and Central Europe in terms of modern biodiversity research.

查看原文本刊更多论文

德国地甲虫DNA条形码文库:Agonum Bonelli属，1810(昆虫亚目，鞘翅目，甲虫科)

地面甲虫属agonumbonelli, 1810年是Platynini部落的一个大属，有许多种显示出大量的种内变异，使正确的识别具有挑战性。作为德国生命条形码计划的一部分，本出版物为德国报道的agonum物种提供了一个全面的DNA条形码库。利用生命数据条形码系统(BOLD)工作台分析了258只甲虫和23个物种的DNA条形码，包括以前研究的序列和68个新生成的序列。基于K2P距离的邻居连接分析显示，所有研究物种具有明显的聚类，15种(65%)具有独特的条形码索引号(bin)。micans/ gonum scitulum、impresum /Agonum sexpunctatumanand duftschmidi/Agonum emarginatum 3种物种对BIN共享但聚类明显。给定的数据集及其分析代表了在现代生物多样性研究方面为德国和中欧的地面甲虫建立一个全面的DNA条形码库的又一重要步骤。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

求助全文

约1分钟内获得全文求助全文

来源期刊

Deutsche Entomologische Zeitschrift 生物-昆虫学

CiteScore

1.60

自引率

0.00%

发文量

审稿时长

3 months

期刊介绍： Founded in 1857 as Berliner Entomologische Zeitschrift, Deutsche Entomologische Zeitschrift is one of the World''s oldest international journals of systematic entomology. It publishes original research papers in English on the systematics, taxonomy, phylogeny, comparative morphology, and biogeography of insects. Other arthropods are also considered where of relevance to the biology of insects. The geographical scope of the journal is worldwide. Deutsche Entomologische Zeitschrift (DEZ) is dedicated to provide an open access, high-quality forum to contribute to the documentation of insect species, their distribution, their properties, and their phylogenetic relationships. All submitted manuscripts are subject to peer-review by the leading specialists for the respective topic. The journal is published in open access high-resolution PDF, semantically enriched HTML and machine-readable XML versions.