Fecal-associated microbiome differences between phlegm-dampness constitution and balanced constitution

Q3 Medicine
Yini Li , Pengfei Zhao , Yunan Zhang , Jianhua Zhen , Lu Zhao , Yanan Cai , Qingyi Lu , Guangrui Huang
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引用次数: 0

Abstract

Objective

This study aimed to explore the structural and functional characteristics of the fecal-associated microbiome (FAM) between the phlegm-dampness constitution (PDC) and balanced constitution (BC), and to screen the related specific operational taxonomic unit (OTU) biomarkers.

Methods

This was a cross-sectional study. After strictly identifying the constitution of subjects, their clinical index was recorded and counted. Fecal samples were collected for 16S rDNA sequencing. Alpha diversity, beta diversity, and the relative abundance of dominant bacterial taxa were used to describe the FAM structure, and the Wilcoxon rank-sum test, MetagenomeSeq, and linear discriminant analysis effect size (LEfSe) were used to screen specific bacterial taxa. Specific OTUs were screened to construct receiver operating characteristic (ROC) curves.

Results

Thirty-two subjects were enrolled, including 22 subjects with BC and 10 subjects with PDC. There were significant differences in cold preference, levels of aspartate transaminase, β2-microglobulin, and creatine kinase MB, and alpha diversity indices (Shannon and Shannoneven) between the two groups. In principal coordinate analysis by abund-jaccard distance measure and partial least squares discriminant analysis, bacterial communities clustered separately between the two groups. Furthermore, based on MetagenomeSeq, LEfSe, and the Wilcoxon rank-sum test, a total of 43, 18, and 130 OTUs were differentially distributed between BC group and PDC group, respectively, and OTU200, OTU133, and OTU353 were screened when P≤ .01. The area under the ROC curve constructed from the 3 selected OTUs was 0.93.

Conclusion

The FAM structure and related functional characteristics of the PDC group differed from those of the BC group. In particular, OTU200, OTU133, and OTU353 can be used as unique markers of PDC to assist clinical diagnosis.

痰湿体质与平衡体质粪便相关微生物组的差异
目的探讨痰湿体质(PDC)和平衡体质(BC)之间粪便相关微生物组(FAM)的结构和功能特征,筛选相关的特异性操作分类单位(OTU)生物标志物。方法采用横断面研究。在严格识别受试者体质后,对其临床指标进行记录和统计。收集粪便样本进行16S rDNA测序。利用α多样性、β多样性和优势细菌类群的相对丰度描述FAM结构,利用Wilcoxon秩和检验、MetagenomeSeq和线性判别分析效应大小(linear discriminant analysis effect size, LEfSe)筛选特定细菌类群。筛选特定的otu,构建受试者工作特征(ROC)曲线。结果共纳入32例患者,其中BC患者22例,PDC患者10例。两组小鼠的冷偏好、天冬氨酸转氨酶、β2-微球蛋白、肌酸激酶MB水平以及α多样性指数(Shannon和Shannoneven)均存在显著差异。在主坐标分析和偏最小二乘判别分析中,细菌群落在两组之间分别聚集。此外,基于MetagenomeSeq、LEfSe和Wilcoxon秩和检验,BC组和PDC组之间分别有43、18和130个otu的差异分布,当P≤0.01时,筛选出OTU200、OTU133和OTU353。选取的3个otu构建的ROC曲线下面积为0.93。结论PDC组FAM结构及相关功能特征与BC组不同。其中OTU200、OTU133、OTU353可作为PDC的独特标志物,辅助临床诊断。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Traditional Chinese Medical Sciences
Journal of Traditional Chinese Medical Sciences Medicine-Complementary and Alternative Medicine
CiteScore
1.90
自引率
0.00%
发文量
53
审稿时长
36 weeks
期刊介绍: Production and Hosting by Elsevier B.V. on behalf of Beijing University of Chinese Medicine Peer review under the responsibility of Beijing University of Chinese Medicine. Journal of Traditional Chinese Medical Sciences is an international, peer-reviewed publication featuring advanced scientific research in Traditional Chinese medicine (TCM). The journal is sponsored by Beijing University of Chinese Medicine and Tsinghua University Press, and supervised by the Ministry of Education of China. The goal of the journal is to serve as an authoritative platform to present state-of-the-art research results. The journal is published quarterly. We welcome submissions of original papers on experimental and clinical studies on TCM, herbs and acupuncture that apply modern scientific research methods. The journal also publishes case reports, reviews, and articles on TCM theory and policy.
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