Evaluation of three preparation methods for living diatoms at a sandy river-mouth tidal flat: conventional acid-cleaning, nuclear staining, and sieving
{"title":"Evaluation of three preparation methods for living diatoms at a sandy river-mouth tidal flat: conventional acid-cleaning, nuclear staining, and sieving","authors":"Mariko Yamamoto, T. Ohtsuka","doi":"10.5507/fot.2019.013","DOIUrl":null,"url":null,"abstract":"Three preparation methods for the identification of diatom flora at a river mouth tidal flat were evaluated in terms of species richness, diversity, and composition using a conventional acid-cleaning method, a nuclear staining method, and a newly introduced sieving method. Twenty-five diatom samples were collected from Fujimae Tidal Flat sediments, Nagoya, Japan, in July 2014. Three methods respectively showed different aspects of the diatom flora. The acid-cleaning method indicated the highest species diversity, but it extracted dead diatoms with living ones indiscriminately. In comparison with the acid-cleaning method, the staining method effectively extracted diatoms with fragile and small-sized cells. The sieving method scraped the sessile diatoms selectively and supplemented the staining method in which sessile diatoms were mostly neglected. A combination of these three methods enables to describe precise diatom flora of a tidal flat.","PeriodicalId":55149,"journal":{"name":"Fottea","volume":"20 1","pages":"17-24"},"PeriodicalIF":1.5000,"publicationDate":"2020-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Fottea","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.5507/fot.2019.013","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
引用次数: 0
Abstract
Three preparation methods for the identification of diatom flora at a river mouth tidal flat were evaluated in terms of species richness, diversity, and composition using a conventional acid-cleaning method, a nuclear staining method, and a newly introduced sieving method. Twenty-five diatom samples were collected from Fujimae Tidal Flat sediments, Nagoya, Japan, in July 2014. Three methods respectively showed different aspects of the diatom flora. The acid-cleaning method indicated the highest species diversity, but it extracted dead diatoms with living ones indiscriminately. In comparison with the acid-cleaning method, the staining method effectively extracted diatoms with fragile and small-sized cells. The sieving method scraped the sessile diatoms selectively and supplemented the staining method in which sessile diatoms were mostly neglected. A combination of these three methods enables to describe precise diatom flora of a tidal flat.
期刊介绍:
Fottea is a journal of Czech Phycological Society (formerly bulletin Czech Phycology). Fottea publishes papers on all aspects of the ecology, physiology, biochemistry, cell biology, molecular biology, systematics and uses of algae (including cyanobacteria)