Evaluation of cross-genus transferability of SSR markers from other legumes to two closely related Onobrychis (Fabaceae) taxa

Q3 Medicine
I. Băcilă, Dana Șuteu, A. Coste, Z. Balázs, G. Coldea
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引用次数: 0

Abstract

Microsatellite markers previously developed for other leguminous species were tested for cross-genus transferability and evaluated for their potential usefulness in providing an improved assessment of the genetic relationships between two closely related taxa belonging to Onobrychis genus (Fabaceae). Candidate microsatellite markers were tested for polymorphism and replicability in sixteen populations of O. montana DC. subsp. transsilvanica (Simonk.) Jáv. and O. montana. Out of the 23 SSRs, there were identified seven polymorphic loci. In total 32 alleles were detected and the number of alleles per locus varied from two to six. PIC values ranged from 0.375 to 0.6454, and four SSRs displayed a PIC > 0.5. Relative uniform rates of genetic diversity were obtained. In case of O. montana DC. subsp. transsilvanica (Simonk.) Jáv. the observed and expected heterozygosity ranged from 0.100 to 0.952 and from 0.219 to 0.525, respectively, while for O. montana ranged from 0.166 to 0.750 and from 0.083 to 0.375, respectively. Seven polymorphic SSRs with clear and reproducible amplification were identified. These markers proved to be very efficient for unambiguous population discrimination based on both geographic and taxonomic criteria. Hereafter, these SSR markers can be used as tools for evolutionary studies in Onobrychis genus, as well in providing knowledge on patterns of the species phylogeography.
其他豆科植物SSR标记在两个亲缘关系密切的Onobrychis(Fabacee)分类群中的跨属可转移性评价
对以前为其他豆科物种开发的微卫星标记进行了跨属可转移性测试,并评估了它们在改进对属于Onobrychis属(豆科)的两个密切相关类群之间遗传关系的评估方面的潜在有用性。在16个山地O.montana DC群体中测试候选微卫星标记的多态性和可复制性。亚种。transsilvanica(西蒙克)Jáv。和O.montana。在23个SSR中,共鉴定出7个多态位点。总共检测到32个等位基因,每个基因座的等位基因数量从2个到6个不等。PIC值在0.375到0.6454之间,四个SSR显示PIC>0.5。获得了相对一致的遗传多样性比率。在O.montana DC的情况下。亚种。transsilvanica(西蒙克)Jáv。观察到的和预期的杂合度分别为0.100至0.952和0.219至0.525,而蒙大拿O.montana的杂合度分别为0.166至0.750和0.083至0.375。鉴定出7个扩增清晰、可重复的多态性ssr。事实证明,这些标记对于基于地理和分类学标准的明确的种群区分是非常有效的。此后,这些SSR标记可作为Onobrychis属进化研究的工具,也可用于提供物种系统地理学模式的知识。
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来源期刊
Notulae Scientia Biologicae
Notulae Scientia Biologicae Biochemistry, Genetics and Molecular Biology-Biochemistry, Genetics and Molecular Biology (miscellaneous)
CiteScore
1.10
自引率
0.00%
发文量
63
审稿时长
12 weeks
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