Analysis of allele frequencies of the selected 15 autosomal STR markers in Tikrit population – Iraq with comparison to Middle Eastern, African, and Europeans

M. Salih, A. Al-Assie, M. Sabbah
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引用次数: 1

Abstract

Short tandem repeats (STRs) have been recommended as the highest polymorphic loci among the humana DNA regions. Therefore, STRs are agreeable to many genetic fields like forensic, population genetics and anthropological studies. The main aim of this research is to evaluate the autosomal STRs in Tikrit city-Iraq, to expand the human genetics database and forensic genetics analysis. The DNA database was obtained from 306 unrelated volunteers from native Tikrit population-Iraq, using 15 autosomal STR loci. The current study determined the allele frequencies in the Tikrit population and then compared them with other national Iraqi populations as well as with populations in the Middle East, Africa, and Europe. The highest level of heterozygosity was observed in D8S1179 and TH01 loci (0.797), while the less level was shown by CSF1PO (0.48). The departure from HWE Equilibrium was recorded in only 3 STR loci from a total of 15 loci analyzed (p<0.003). The Combined Match Probability (CMP) for 15 autosomal STR was 1 in 7.89208×10-19 and the Combined Discrimination Power (CDP) was 0.9999999997. The discrimination power (DP) was especially high in D2S1338, D18S51, D19S433 and D21S11. Based on the results observed in a Dendrogram, Tikrit population was clustered with other populations, likely reflecting the historical and geographical factors. D2S1338, D18S51, D19S433 and D21S11 markers were recognized as suitable for forensic genetics analysis in Tikrit population. Also, the 15 STRs markers provide information for the studies of genetic distances between the current study and other included populations to be compared with this study.
伊拉克提克里特人群中选定的15个常染色体STR标记的等位基因频率分析,并与中东、非洲和欧洲人群进行比较
短串联重复序列(STRs)被认为是人类DNA区域中多态性最高的位点。因此,STRs适用于许多遗传学领域,如法医、种群遗传学和人类学研究。本研究的主要目的是评估伊拉克提克里特市常染色体STRs,以扩大人类遗传学数据库和法医遗传学分析。利用15个常染色体STR位点,从306名来自伊拉克提克里特本地人的无血缘关系志愿者中获得DNA数据库。目前的研究确定了提克里特人口的等位基因频率,然后将其与伊拉克其他国家的人口以及中东、非洲和欧洲的人口进行比较。D8S1179和TH01位点的杂合度最高(0.797),CSF1PO位点的杂合度较低(0.48)。在分析的15个基因座中,只有3个STR基因座偏离了HWE平衡(p<0.003)。15例常染色体STR的联合匹配概率(CMP)为1 (7.89208×10-19),联合鉴别力(CDP)为0.9999999997。D2S1338、D18S51、D19S433和D21S11的识别功率(DP)特别高。根据在树形图中观察到的结果,提克里特人口与其他人口聚集在一起,可能反映了历史和地理因素。D2S1338、D18S51、D19S433和D21S11标记适合提克里特人群法医遗传学分析。此外,这15个STRs标记为本研究与其他纳入人群的遗传距离研究提供了信息。
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来源期刊
Asia-pacific Journal of Molecular Biology and Biotechnology
Asia-pacific Journal of Molecular Biology and Biotechnology Biochemistry, Genetics and Molecular Biology-Biotechnology
CiteScore
0.90
自引率
0.00%
发文量
25
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