Molecular differentiation of Turkish and Common hazels (Corylus colurna L. and Corylus avellana L.) using multiplexed nuclear microsatellite markers

IF 1.7 3区 农林科学 Q2 FORESTRY
B. Fussi, D. Kavaliauskas, M. Šeho
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引用次数: 2

Abstract

Corylus colurna is considered as important tree species under climate change for dry and warm conditions in Central Europe and was overused because of its valuable wood. Therefore Turkish hazel is now present only in small isolated populations and is protected under IUCN. Genetic conservation of this tree species plays a key role in future sustainable forest development. Turkish hazel co-occurs with Common hazel (C. avellana) in its whole distribution area and may form hybrids. To differentiate between the pure species and their hybrids, cross-species amplifying markers are required. In this study we have evaluated existing simple sequence repeat (SSR) markers using altogether 128 samples of C. avellana and C. colurna. Fifteen nuclear SSRs have generated easy to-score alleles in the two species and 13 of them were highly polymorphic. For  all 15 markers the mean allele number, average observed heterozygosity, genetic diversity and polymorphism information index were high. The two most polymorphic SSRs were L1.10 and CaT-B501 with 19 and 16 alleles, respectively. Structure analysis proved the differentiation of the two species C. avellana and C. colurna. No hybridization was detected in the analysed populations. Results also indicated that C. colurna from Balkan Peninsula and Asia Minor belong to separate groups. Our study presents highly polymorphic, easy to score, ready to use SSR-multiplexes, which can be applied in population genetics and gene conservation studies.
利用多核微卫星标记对土耳其榛子和普通榛子(Corylus colurna L.和Corylus avellana L.)的分子分化
Corylus colurna被认为是中欧干旱和温暖条件下气候变化下的重要树种,由于其珍贵的木材而被过度使用。因此,土耳其榛子现在只存在于小规模的孤立种群中,并受到国际自然保护联盟的保护。该树种的遗传保护在未来森林可持续发展中发挥着关键作用。土耳其榛子在其整个分布区与普通榛子(C.avellana)共存,并可能形成杂交种。为了区分纯物种及其杂交种,需要跨物种扩增标记。在本研究中,我们使用总共128个阿维拉纳C.avellana和科尔纳C.colurna的样本来评估现有的简单序列重复(SSR)标记。在这两个物种中,有15个核SSR产生了易于评分的等位基因,其中13个具有高度多态性。所有15个标记的平均等位基因数、平均观察杂合性、遗传多样性和多态性信息指数均较高。多态性最高的两个SSR是L1.10和CaT-B501,分别有19个和16个等位基因。结构分析证明了两个种C.avellana和C.colurna的分化。在分析的群体中未检测到杂交。结果还表明,来自巴尔干半岛和小亚细亚的C.colurna属于不同的类群。我们的研究提供了高度多态性、易于评分、易于使用的SSR多重标记,可应用于群体遗传学和基因保护研究。
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来源期刊
CiteScore
2.20
自引率
11.10%
发文量
11
审稿时长
12 weeks
期刊介绍: Annals of Forest Research is a semestrial open access journal, which publishes research articles, research notes and critical review papers, exclusively in English, on topics dealing with forestry and environmental sciences. The journal promotes high scientific level articles, by following international editorial conventions and by applying a peer-review selection process.
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