Identification of eyeworm (Oxyspirura petrowi) and caecal worm (Aulonocephalus pennula) infection levels in Northern bobwhite quail (Colinus virginianus) of the Rolling Plains, TX using a mobile research laboratory: Implications for regional surveillance

Q1 Biochemistry, Genetics and Molecular Biology
Kendall R. Blanchard , Aravindan Kalyanasundaram , Cassandra Henry , Kelly A. Commons , Matthew Z. Brym , Kalin Skinner , James G. Surles , Ronald J. Kendall
{"title":"Identification of eyeworm (Oxyspirura petrowi) and caecal worm (Aulonocephalus pennula) infection levels in Northern bobwhite quail (Colinus virginianus) of the Rolling Plains, TX using a mobile research laboratory: Implications for regional surveillance","authors":"Kendall R. Blanchard ,&nbsp;Aravindan Kalyanasundaram ,&nbsp;Cassandra Henry ,&nbsp;Kelly A. Commons ,&nbsp;Matthew Z. Brym ,&nbsp;Kalin Skinner ,&nbsp;James G. Surles ,&nbsp;Ronald J. Kendall","doi":"10.1016/j.bdq.2019.100092","DOIUrl":null,"url":null,"abstract":"<div><p>Over the last few decades, there has been a decline in Northern bobwhite quail (<em>Colinus virginianus</em>) throughout their native range. While there are various factors that may be influencing this decline, it is suggested that parasites should be taken into consideration as a potential contributor in the Rolling Plains Ecoregion. High prevalence of the eyeworm (<em>Oxyspirura petrowi</em>) and caecal worm (<em>Aulonocephalus pennula</em>) in bobwhite of this region, coupled with a continuous decline, creates a need to assess infection through alternative methods for regional surveillance. Previous studies have developed a qPCR method and mobile research laboratory as an option for nonlethal procedures. However, there is still a need for standardization of these techniques. Therefore, this study builds on previous protocols to develop an application that considers factors that may influence qPCR results. In this study, cloacal swabs are collected from bobwhite in three locations throughout the Rolling Plains and scaled based on amount of feces present on the swab. This data is compared to qPCR standards as a limit of quantification for both eyeworm and caecal worm to define parasitic infection levels. Binary logistic regressions confirm that the probability of detection increases for both eyeworm (Odds Ratio: 2.3738; 95% Confidence Interval: [1.7804, 3.1649]) and caecal worm (Odds Ratio: 2.8516; 95% Confidence Interval: [2.2235, 3.6570]) as swab score increases. Infection levels for eyeworm and caecal worm are based on the generated cycle threshold value averages of qPCR standards. Based on the results of this study, this method can be applied in the mobile research laboratory to quantitatively assess regional parasitic infection in bobwhite throughout the Rolling Plains.</p></div>","PeriodicalId":38073,"journal":{"name":"Biomolecular Detection and Quantification","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2019-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.bdq.2019.100092","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomolecular Detection and Quantification","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2214753519300087","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
引用次数: 1

Abstract

Over the last few decades, there has been a decline in Northern bobwhite quail (Colinus virginianus) throughout their native range. While there are various factors that may be influencing this decline, it is suggested that parasites should be taken into consideration as a potential contributor in the Rolling Plains Ecoregion. High prevalence of the eyeworm (Oxyspirura petrowi) and caecal worm (Aulonocephalus pennula) in bobwhite of this region, coupled with a continuous decline, creates a need to assess infection through alternative methods for regional surveillance. Previous studies have developed a qPCR method and mobile research laboratory as an option for nonlethal procedures. However, there is still a need for standardization of these techniques. Therefore, this study builds on previous protocols to develop an application that considers factors that may influence qPCR results. In this study, cloacal swabs are collected from bobwhite in three locations throughout the Rolling Plains and scaled based on amount of feces present on the swab. This data is compared to qPCR standards as a limit of quantification for both eyeworm and caecal worm to define parasitic infection levels. Binary logistic regressions confirm that the probability of detection increases for both eyeworm (Odds Ratio: 2.3738; 95% Confidence Interval: [1.7804, 3.1649]) and caecal worm (Odds Ratio: 2.8516; 95% Confidence Interval: [2.2235, 3.6570]) as swab score increases. Infection levels for eyeworm and caecal worm are based on the generated cycle threshold value averages of qPCR standards. Based on the results of this study, this method can be applied in the mobile research laboratory to quantitatively assess regional parasitic infection in bobwhite throughout the Rolling Plains.

Abstract Image

Abstract Image

Abstract Image

使用移动研究实验室鉴定德克萨斯州Rolling Plains的北方白腹鹌鹑(Colinus virginianus)的眼虫(石油氧螺)和盲肠蠕虫(Aulonocephalus pennula)感染水平:对区域监测的意义。
在过去的几十年里,北方白腹鹌鹑(Colinus virginianus)在其整个原生范围内数量有所减少。虽然有各种因素可能会影响这种下降,但建议将寄生虫视为滚动平原生态区的潜在贡献者。该地区bobwhite的眼虫(石油氧化螺)和盲肠虫(三角锥虫)的高流行率,加上持续下降,需要通过区域监测的替代方法来评估感染情况。先前的研究已经开发了qPCR方法和移动研究实验室,作为非致命程序的一种选择。然而,这些技术仍然需要标准化。因此,本研究以先前的方案为基础,开发了一种考虑可能影响qPCR结果的因素的应用程序。在这项研究中,从整个滚动平原的三个地点的山猫身上采集了泄殖腔拭子,并根据拭子上的粪便量进行了缩放。将该数据与qPCR标准进行比较,作为眼镜虫和盲肠虫的定量限度,以确定寄生虫感染水平。二元逻辑回归证实,随着拭子得分的增加,眼镜虫(比值比:2.3738;95%置信区间:[1.7804,3.1649])和盲肠蠕虫(比值比∶2.8516;95%置信间隔:[2.22353.6570])的检测概率都会增加。眼丝虫和盲肠蠕虫的感染水平基于qPCR标准的生成周期阈值平均值。基于这项研究的结果,该方法可应用于移动研究实验室,以定量评估整个滚动平原地区山猫的区域寄生虫感染情况。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Biomolecular Detection and Quantification
Biomolecular Detection and Quantification Biochemistry, Genetics and Molecular Biology-Biochemistry
CiteScore
14.20
自引率
0.00%
发文量
0
审稿时长
8 weeks
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信