{"title":"Cuproptosis-Related Gene - <i>SLC31A1, FDX1</i> and <i>ATP7B</i> - Polymorphisms are Associated with Risk of Lung Cancer.","authors":"Yuhui Yun, Yun Wang, Ende Yang, Xin Jing","doi":"10.2147/PGPM.S372824","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Cuproptosis is a novel copper-dependent cell death, and the copper level was increased in lung cancer patients. However, few studies evaluated the association between single-nucleotide polymorphisms (SNPs) in cuproptosis-related genes and lung cancer risk.</p><p><strong>Methods: </strong>Six SNPs of the <i>SLC31A1, FDX1</i> and <i>ATP7B</i> genes were genotyped in a case-control cohort including 650 lung cancer cases and 650 controls using the MassARRAY platform.</p><p><strong>Results: </strong>The minor alleles of <i>SLC31A1</i>-rs10981694 and <i>FDX1</i>-rs10488764 were associated with an increased risk of lung cancer (rs10981694: OR=1.455, 95% CI: 1.201-1.763, <i>p</i><0.001; rs10488764: OR=1.483, 95% CI: 1.244-1.768, <i>p</i><0.001). In contrast, the minor alleles of rs9535826 and rs9535828 in <i>ATP7B</i> were related to a decreased risk of the disease (rs9535826: OR=0.714, 95% CI: 0.608-0.838 <i>p</i><0.001; rs9535828: OR=0.679, 95% CI: 0.579-0.796, <i>p</i><0.001). The frequencies of rs10981694-TG/GG and rs10488764-GA/AA genotypes were significantly higher in lung cancer cases than that in controls, making them risk genotypes for the disease (<i>p</i> < 0.001); while the rs9535826-TG/GG and rs9535828-GA/AA genotypes were protective genotypes and associated with a reduced risk of the disease (<i>p</i><0.001). Genetic model evaluation revealed that <i>SLC31A1</i>-rs10981694 and <i>FDX1</i>-rs10488764 were associated with a growing risk of lung cancer in dominant, recessive and log-additive models (<i>p</i><0.001). Moreover, rs9535826 and rs9535828 in <i>ATP7B</i> were related to a declining risk of the disease in three genetic models (<i>p</i><0.001). In addition, stratification analysis showed that <i>FDX1</i>-rs10488764 was risk variant for lung cancer in both smokers and nonsmokers, and was associated with risk of each pathological type of lung cancer (<i>p</i><0.008).</p><p><strong>Conclusion: </strong>The results shed new light on the correlation between cuproptosis-related genes and risk of lung cancer.</p>","PeriodicalId":509088,"journal":{"name":"Pharmacogenomics and Personalized Medicine","volume":" ","pages":"733-742"},"PeriodicalIF":0.0000,"publicationDate":"2022-07-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/0e/00/pgpm-15-733.PMC9342429.pdf","citationCount":"19","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Pharmacogenomics and Personalized Medicine","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.2147/PGPM.S372824","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2022/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 19
Abstract
Background: Cuproptosis is a novel copper-dependent cell death, and the copper level was increased in lung cancer patients. However, few studies evaluated the association between single-nucleotide polymorphisms (SNPs) in cuproptosis-related genes and lung cancer risk.
Methods: Six SNPs of the SLC31A1, FDX1 and ATP7B genes were genotyped in a case-control cohort including 650 lung cancer cases and 650 controls using the MassARRAY platform.
Results: The minor alleles of SLC31A1-rs10981694 and FDX1-rs10488764 were associated with an increased risk of lung cancer (rs10981694: OR=1.455, 95% CI: 1.201-1.763, p<0.001; rs10488764: OR=1.483, 95% CI: 1.244-1.768, p<0.001). In contrast, the minor alleles of rs9535826 and rs9535828 in ATP7B were related to a decreased risk of the disease (rs9535826: OR=0.714, 95% CI: 0.608-0.838 p<0.001; rs9535828: OR=0.679, 95% CI: 0.579-0.796, p<0.001). The frequencies of rs10981694-TG/GG and rs10488764-GA/AA genotypes were significantly higher in lung cancer cases than that in controls, making them risk genotypes for the disease (p < 0.001); while the rs9535826-TG/GG and rs9535828-GA/AA genotypes were protective genotypes and associated with a reduced risk of the disease (p<0.001). Genetic model evaluation revealed that SLC31A1-rs10981694 and FDX1-rs10488764 were associated with a growing risk of lung cancer in dominant, recessive and log-additive models (p<0.001). Moreover, rs9535826 and rs9535828 in ATP7B were related to a declining risk of the disease in three genetic models (p<0.001). In addition, stratification analysis showed that FDX1-rs10488764 was risk variant for lung cancer in both smokers and nonsmokers, and was associated with risk of each pathological type of lung cancer (p<0.008).
Conclusion: The results shed new light on the correlation between cuproptosis-related genes and risk of lung cancer.