{"title":"Research on melanoma image segmentation by incorporating medical prior knowledge.","authors":"Hong Zhao, Aolong Wang, Chenpeng Zhang","doi":"10.7717/peerj-cs.1122","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Melanoma image segmentation has important clinical value in the diagnosis and treatment of skin diseases. However, due to the difficulty of obtaining data sets, and the sample imbalance, the quality of melanoma image data sets is low, which reduces the accuracy and the effectiveness of computer aided diagnosis of melanoma image.</p><p><strong>Objective: </strong>In this work, a method of melanoma image segmentation by incorporating medical prior knowledge is proposed to improve the fidelity of melanoma image segmentation.</p><p><strong>Methods: </strong>Anatomical analysis of the melanoma image reveal the star shape of the melanoma image, which can be encoded into the loss function of the UNet model as a prior knowledge.</p><p><strong>Results: </strong>Our experimental results on the ISIC-2017 data set demonstrate that the model by incorporating medical prior knowledge obtain a mIoU (Mean Intersection over Union) of 87.41%, a Dice Similarity Coefficient of 93.49%.</p><p><strong>Conclusion: </strong>Therefore, the model by incorporating medical prior knowledge achieve the first rank in the segmentation task comparing to other models and has high clinical value.</p>","PeriodicalId":503620,"journal":{"name":"PeerJ Computer Science","volume":" ","pages":"e1122"},"PeriodicalIF":0.0000,"publicationDate":"2022-10-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9575861/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"PeerJ Computer Science","FirstCategoryId":"94","ListUrlMain":"https://doi.org/10.7717/peerj-cs.1122","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2022/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Background: Melanoma image segmentation has important clinical value in the diagnosis and treatment of skin diseases. However, due to the difficulty of obtaining data sets, and the sample imbalance, the quality of melanoma image data sets is low, which reduces the accuracy and the effectiveness of computer aided diagnosis of melanoma image.
Objective: In this work, a method of melanoma image segmentation by incorporating medical prior knowledge is proposed to improve the fidelity of melanoma image segmentation.
Methods: Anatomical analysis of the melanoma image reveal the star shape of the melanoma image, which can be encoded into the loss function of the UNet model as a prior knowledge.
Results: Our experimental results on the ISIC-2017 data set demonstrate that the model by incorporating medical prior knowledge obtain a mIoU (Mean Intersection over Union) of 87.41%, a Dice Similarity Coefficient of 93.49%.
Conclusion: Therefore, the model by incorporating medical prior knowledge achieve the first rank in the segmentation task comparing to other models and has high clinical value.
背景:黑色素瘤图像分割在皮肤病的诊断和治疗中具有重要的临床价值。然而,由于数据集获取难度大、样本不平衡等原因,导致黑素瘤图像数据集质量较低,降低了黑素瘤图像计算机辅助诊断的准确性和有效性。目的:提出一种结合医学先验知识的黑色素瘤图像分割方法,提高黑色素瘤图像分割的保真度。方法:对黑素瘤图像进行解剖分析,得到黑素瘤图像的星形,作为先验知识编码到UNet模型的损失函数中。结果:我们在ISIC-2017数据集上的实验结果表明,结合医学先验知识的模型获得了87.41%的mIoU (Mean Intersection over Union),骰子相似系数为93.49%。结论:因此,与其他模型相比,纳入医学先验知识的模型在分割任务中排名第一,具有较高的临床价值。