Bioinformatics analysis reveals three key genes and four survival genes associated with youth-onset NSCLC.

IF 1.6
Open medicine (Warsaw, Poland) Pub Date : 2022-07-06 eCollection Date: 2022-01-01 DOI:10.1515/med-2022-0492
Xuan Han, Peng Ren, Shaohua Ma
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引用次数: 2

Abstract

Youth-onset non-small cell lung cancer (NSCLC) is a heterogeneous disease. It has a unique clinicopathology and special genetic background. In this study, three key genes, CDC20, CCNB2, and BUB1, have been identified in youth-onset NSCLC tumor tissues based on the TCGA and GEO cohorts. Functional enrichment analysis reveals that the "oocyte meiosis," "cell cycle," and the "P53 signaling pathway" are significantly enriched. Additionally, four survival genes, including AKAP12, CRIM1, FEN1, and SLC7A11, that affect the prognosis of youth-onset NSCLC patients are identified in this study. Finally, we construct a risk model to predict the overall survival of youth-onset NSCLC patients, the AUC of the risk model in 1, 3, and 5 years of overall survival is 0.808, 0.844, and 0.728. This study aims to provide a novel idea to explore the pathogenic genes of youth-onset NSCLC.

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生物信息学分析揭示了3个关键基因和4个存活基因与青年发病NSCLC相关。
青年非小细胞肺癌(NSCLC)是一种异质性疾病。它具有独特的临床病理和特殊的遗传背景。在本研究中,基于TCGA和GEO队列,在青年发病的NSCLC肿瘤组织中发现了三个关键基因CDC20、CCNB2和BUB1。功能富集分析显示,“卵母细胞减数分裂”、“细胞周期”和“P53信号通路”显著富集。此外,本研究还发现了AKAP12、CRIM1、FEN1和SLC7A11四个影响青年起病NSCLC患者预后的生存基因。最后,我们构建了预测年轻发病NSCLC患者总生存期的风险模型,总生存期1年、3年和5年的风险模型AUC分别为0.808、0.844和0.728。本研究旨在为探索青年发病NSCLC的致病基因提供新的思路。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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