Prognostic Value of LHFPL Tetraspan Subfamily Member 6 (LHFPL6) in Gastric Cancer: A Study Based on Bioinformatics Analysis and Experimental Validation.

Pharmacogenomics and Personalized Medicine Pub Date : 2021-11-20 eCollection Date: 2021-01-01 DOI:10.2147/PGPM.S332345
Yuan-Jie Liu, Sheng-Yan Yin, Shu-Hong Zeng, Yi-Dou Hu, Meng-Qi Wang, Pan Huang, Jie-Pin Li
{"title":"Prognostic Value of LHFPL Tetraspan Subfamily Member 6 <i>(LHFPL6)</i> in Gastric Cancer: A Study Based on Bioinformatics Analysis and Experimental Validation.","authors":"Yuan-Jie Liu,&nbsp;Sheng-Yan Yin,&nbsp;Shu-Hong Zeng,&nbsp;Yi-Dou Hu,&nbsp;Meng-Qi Wang,&nbsp;Pan Huang,&nbsp;Jie-Pin Li","doi":"10.2147/PGPM.S332345","DOIUrl":null,"url":null,"abstract":"<p><strong>Purpose: </strong>The identification of biomarkers and effective therapeutic targets for gastric cancer (GC), the most common cause of cancer-related deaths around the world, is currently a major focus in research. Here, we examined the utility of LHFPL6 as a prognostic biomarker and therapeutic target for GC.</p><p><strong>Methods: </strong>We explored the clinical relevance, function, and molecular role of LHFPL6 in GC using the MethSurv, cBioPortal, TIMER, Gene Expression Profiling Interactive Analysis, ONCOMINE, MEXPRESS, and EWAS Atlas databases. The GSE118919, GSE29272, and GSE13861 datasets were used for differential expression analysis. Using The Cancer Genome Atlas, we developed a Cox regression model and assessed the clinical significance of LHFPLs. In addition, we used the \"CIBERSORT\" algorithm to make reliable immune infiltration estimations. Western blot and immunohistochemistry were used to examine protein expression. Cell migration and invasion were assessed using transwell experiments. THP-1-derived macrophages and GC cells were co-cultured in order to model tumor-macrophage interactions in vitro. The levels of CD206 and CD163 were measured using immunofluorescence assays. The results were visualized with the \"ggplot2\" and \"circlize\" packages.</p><p><strong>Results: </strong>Our results showed that in GC, LHFPL6 overexpression was significantly associated with a poor prognosis. Our findings also suggested that LHFPL6 may be involved in the activation of the epithelial-mesenchymal transition. Furthermore, LHFPL6 expression showed a positive correlation with the abundance of M2 macrophages, which are potent immunosuppressors.</p><p><strong>Conclusion: </strong>LHFPL6 could be a prognostic biomarker and therapeutic target for GC.</p>","PeriodicalId":509088,"journal":{"name":"Pharmacogenomics and Personalized Medicine","volume":" ","pages":"1483-1504"},"PeriodicalIF":0.0000,"publicationDate":"2021-11-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/58/4a/pgpm-14-1483.PMC8612673.pdf","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Pharmacogenomics and Personalized Medicine","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.2147/PGPM.S332345","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2021/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 1

Abstract

Purpose: The identification of biomarkers and effective therapeutic targets for gastric cancer (GC), the most common cause of cancer-related deaths around the world, is currently a major focus in research. Here, we examined the utility of LHFPL6 as a prognostic biomarker and therapeutic target for GC.

Methods: We explored the clinical relevance, function, and molecular role of LHFPL6 in GC using the MethSurv, cBioPortal, TIMER, Gene Expression Profiling Interactive Analysis, ONCOMINE, MEXPRESS, and EWAS Atlas databases. The GSE118919, GSE29272, and GSE13861 datasets were used for differential expression analysis. Using The Cancer Genome Atlas, we developed a Cox regression model and assessed the clinical significance of LHFPLs. In addition, we used the "CIBERSORT" algorithm to make reliable immune infiltration estimations. Western blot and immunohistochemistry were used to examine protein expression. Cell migration and invasion were assessed using transwell experiments. THP-1-derived macrophages and GC cells were co-cultured in order to model tumor-macrophage interactions in vitro. The levels of CD206 and CD163 were measured using immunofluorescence assays. The results were visualized with the "ggplot2" and "circlize" packages.

Results: Our results showed that in GC, LHFPL6 overexpression was significantly associated with a poor prognosis. Our findings also suggested that LHFPL6 may be involved in the activation of the epithelial-mesenchymal transition. Furthermore, LHFPL6 expression showed a positive correlation with the abundance of M2 macrophages, which are potent immunosuppressors.

Conclusion: LHFPL6 could be a prognostic biomarker and therapeutic target for GC.

Abstract Image

Abstract Image

Abstract Image

基于生物信息学分析和实验验证的lhfpll四跨类亚家族6 (LHFPL6)在胃癌中的预后价值研究
目的:确定胃癌(GC)的生物标志物和有效治疗靶点是目前研究的重点,胃癌是世界上最常见的癌症相关死亡原因。在这里,我们研究了LHFPL6作为胃癌预后生物标志物和治疗靶点的效用。方法:利用MethSurv、cbiopportal、TIMER、基因表达谱交互分析、ONCOMINE、MEXPRESS和EWAS Atlas数据库,探讨LHFPL6在GC中的临床相关性、功能和分子作用。使用GSE118919、GSE29272和GSE13861数据集进行差异表达分析。利用癌症基因组图谱,我们建立了Cox回归模型并评估了LHFPLs的临床意义。此外,我们使用“CIBERSORT”算法进行可靠的免疫浸润估计。Western blot和免疫组织化学检测蛋白表达。采用transwell实验评估细胞迁移和侵袭。将thp -1来源的巨噬细胞与GC细胞共培养,以模拟肿瘤-巨噬细胞的体外相互作用。用免疫荧光法测定CD206和CD163的水平。用“ggplot2”和“circlize”包将结果可视化。结果:我们的研究结果显示,在GC中,LHFPL6过表达与不良预后显著相关。我们的研究结果还表明LHFPL6可能参与了上皮-间质转化的激活。此外,LHFPL6的表达与M2巨噬细胞的丰度呈正相关,而M2巨噬细胞是有效的免疫抑制剂。结论:LHFPL6可作为胃癌的预后生物标志物和治疗靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信
小红书