Deep Learning Identification of Asthma Inhaler Techniques in Clinical Notes.

Bhavani Singh Agnikula Kshatriya, Elham Sagheb, Chung-Il Wi, Jungwon Yoon, Hee Yun Seol, Young Juhn, Sunghwan Sohn
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Abstract

There are significant variabilities in clinicians' guideline-concordant documentation in asthma care. However, assessing clinicians' documentation is not feasible using only structured data but requires labor intensive chart review of electronic health records. Although the national asthma guidelines are available it is still challenging to use them as a real-time tool for providing feedback on adhering documentation guidelines for asthma care improvement. A certain guideline element, such as teaching or reviewing inhaler techniques, is difficult to capture by handcrafted rules since it requires contextual understanding of clinical narratives. This study examined a deep learning based natural language model, Bidirectional Encoder Representations from Transformers (BERT) coupled with distant supervision to identify inhaler techniques from clinical narratives. The BERT model with distant supervision outperformed the rule-based approach and achieved performance gain compared with the BERT without distant supervision.

深度学习识别临床笔记中的哮喘吸入器技术。
在哮喘治疗中,临床医生与指南一致的记录存在很大差异。然而,仅使用结构化数据来评估临床医生的文件记录是不可行的,还需要对电子健康记录进行劳动密集型的图表审查。虽然国家哮喘指南已经出台,但要将其作为一种实时工具,为哮喘护理改进提供文件记录指南遵守情况的反馈信息,仍然具有挑战性。某些指南要素,如教授或审查吸入器技术,很难通过手工制定的规则来捕捉,因为这需要对临床叙述的上下文进行理解。本研究研究了基于深度学习的自然语言模型--转换器双向编码器表征(BERT)与远程监督相结合,从临床叙述中识别吸入器技术。与无远程监督的 BERT 相比,有远程监督的 BERT 模型优于基于规则的方法,并实现了性能提升。
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