In silico analysis of the antidiabetic terpenoid acankoreagenin binding to PPARγ.

In Silico Pharmacology Pub Date : 2021-04-15 eCollection Date: 2021-01-01 DOI:10.1007/s40203-021-00091-0
Gérard Vergoten, Christian Bailly
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Abstract

Acankoreagenin (ACK) is a lupane triterpene found in several Acanthopanax and Schefflera plant species. ACK, also known as acankoreanogenin or HLEDA, bears a major structural analogy with other lupane triterpenoids such as impressic acid (IA) and the largely used phytochemical betulinic acid (BA). These compounds display marked anti-inflammatory, anti-diabetes, and anti-cancer properties. BA can form stable complexes with the peroxisome proliferator-activated receptor gamma (PPARγ). The tridimensional structure of the BA-PPARγ complex was used to perform a molecular docking analysis of the binding of ACK and IA to the protein. The 3-hydroxyl epimers (R/S) of each natural product were also modeled to examine the role of the C3-OH stereochemistry that distinguishes BA [3(S)] from ACK and AI [3(R)]. Calculations indicate that ACK can form more stable complexes with PPARγ than BA, upon insertion of the drug into the same binding pocket. The inversion of the C3-OH stereochemistry is not an obstacle for binding and the additional carboxy group of ACK at C23 position seems to reinforce the protein interaction. The 3-hydroxyl group does not play a major role in the geometry of the protein-drug complex, which is preserved between BA and ACK. Additional structure-binding relationships are provided, through the evaluation of the PPARγ binding capacity of ACK derivatives. Binding of ACK to PPARγ would account for its marked antidiabetic effect, at least partially. ACK can be used as a platform to design new antidiabetic compounds.

抗糖尿病萜类化合物 Acankoreagenin 与 PPARγ 结合的硅学分析。
Acankoreanagenin (ACK) 是一种羽扇豆三萜类化合物,存在于多种 Acanthopanax 和 Schefflera 植物物种中。ACK 又称 Acankoreanogenin 或 HLEDA,与其他羽扇豆三萜类化合物(如印楝酸(IA)和常用的植物化学物质白桦脂酸(BA))在结构上有很大相似之处。这些化合物具有明显的抗炎、抗糖尿病和抗癌特性。BA 能与过氧化物酶体增殖激活受体γ(PPARγ)形成稳定的复合物。利用 BA-PPARγ 复合物的三维结构,对 ACK 和 IA 与该蛋白的结合进行了分子对接分析。还对每种天然产物的 3-羟基表聚体(R/S)进行了建模,以研究 C3-OH 立体化学在区分 BA [3(S)] 与 ACK 和 AI [3(R)] 方面的作用。计算结果表明,ACK 与 PPARγ 形成的复合物比 BA 更稳定,当药物插入相同的结合口袋时。C3-OH 立体化学结构的反转并不妨碍其结合,ACK 在 C23 位置上的额外羧基似乎加强了与蛋白质的相互作用。3- 羟基在蛋白质-药物复合物的几何结构中并不扮演重要角色,BA 和 ACK 之间保留了这种几何结构。通过评估 ACK 衍生物与 PPARγ 的结合能力,提供了更多的结构-结合关系。ACK 与 PPARγ 的结合至少可以部分解释其显著的抗糖尿病作用。ACK 可用作设计新的抗糖尿病化合物的平台。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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