Challenges and possible solutions for decoding extranasal olfactory receptors.

IF 5.5 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
FEBS Journal Pub Date : 2021-07-01 Epub Date: 2020-11-06 DOI:10.1111/febs.15606
Siddhant Kalra, Aayushi Mittal, Manisha Bajoria, Tripti Mishra, Sidrah Maryam, Debarka Sengupta, Gaurav Ahuja
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引用次数: 4

Abstract

Olfactory receptors are primarily known to be expressed in the olfactory epithelium of the nasal cavity and therefore assist in odor perception. With the advent of high-throughput omics technologies such as tissue microarray or RNA sequencing, a large number of olfactory receptors have been reported to be expressed in the nonolfactory tissues. Although these technologies uncovered the expression of these olfactory receptors in the nonchemosensory tissues, unfortunately, they failed to reveal the information about their cell type of origin. Accurate characterization of the cell types should be the first step towards devising cell type-specific assays for their functional evaluation. Single-cell RNA-sequencing technology resolved some of these apparent limitations and opened new means to interrogate the expression of these extranasal olfactory receptors at the single-cell resolution. Moreover, the availability of large-scale, multi-organ/species single-cell expression atlases offer ample resources for the systematic reannotation of these receptors in a cell type-specific manner. In this Viewpoint article, we discuss some of the technical limitations that impede the in-depth understanding of these extranasal olfactory receptors, with a special focus on odorant receptors. Moreover, we also propose a list of single cell-based omics technologies that could further promulgate the opportunity to decipher the regulatory network that drives the odorant receptors expression at atypical locations.

解码鼻外嗅觉受体的挑战和可能的解决方案。
嗅觉受体主要在鼻腔的嗅觉上皮中表达,因此有助于嗅觉感知。随着组织微阵列或RNA测序等高通量组学技术的出现,大量嗅觉受体已被报道在非嗅觉组织中表达。虽然这些技术揭示了这些嗅觉受体在非化学感觉组织中的表达,但不幸的是,它们未能揭示其细胞类型起源的信息。细胞类型的准确表征应该是设计细胞类型特异性分析以进行功能评估的第一步。单细胞rna测序技术解决了这些明显的局限性,并开辟了在单细胞分辨率下询问这些鼻外嗅觉受体表达的新手段。此外,大规模、多器官/物种单细胞表达图谱的可用性为以细胞类型特异性的方式系统地重新注释这些受体提供了充足的资源。在这篇观点文章中,我们讨论了一些阻碍深入理解这些鼻外嗅觉受体的技术限制,特别关注气味受体。此外,我们还提出了一系列基于单细胞的组学技术,这些技术可以进一步揭示在非典型位置驱动气味受体表达的调控网络。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
FEBS Journal
FEBS Journal 生物-生化与分子生物学
CiteScore
11.70
自引率
1.90%
发文量
375
审稿时长
1 months
期刊介绍: The FEBS Journal is an international journal devoted to the rapid publication of full-length papers covering a wide range of topics in any area of the molecular life sciences. The criteria for acceptance are originality and high quality research, which will provide novel perspectives in a specific area of research, and will be of interest to our broad readership. The journal does not accept papers that describe the expression of specific genes and proteins or test the effect of a drug or reagent, without presenting any biological significance. Papers describing bioinformatics, modelling or structural studies of specific systems or molecules should include experimental data.
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