APC and AXIN2 Are Promising Biomarker Candidates for the Early Detection of Adenomas and Hyperplastic Polyps.

IF 2.4 Q2 MATHEMATICAL & COMPUTATIONAL BIOLOGY
Cancer Informatics Pub Date : 2020-11-11 eCollection Date: 2020-01-01 DOI:10.1177/1176935120972383
Sama Rezasoltani, Mahrooyeh Hadizadeh, Mina Golmohammadi, Ehsan Nazemalhossini-Mojarad, Sina Salari, Hamid Rezvani, Hamid Asadzadeh-Aghdaei, Michael Ladomery, Chris Young, Fakhrosadat Anaraki, Sarah Almond, Maziar Ashrafian Bonab
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引用次数: 1

Abstract

Aberrant activation of the WNT/CTNNB1 pathway is notorious in colorectal cancer (CRC). Here, we demonstrate that the expression of specific and crucial WNT signaling pathway genes is linked to disease progression in colonic adenomatous (AP) and hyperplastic (HP) polyps in an Iranian patient population. Thus, we highlight potential gene expression profiles as candidate novel biomarkers for the early detection of CRC. From a 12-month study (2016-2017), 44 biopsy samples were collected during colonoscopy from the patients with colorectal polyps and 10 healthy subjects for normalization. Clinical and demographic data were collected in all cases, and mRNA expression of APC, CTNNB1, CDH1, AXIN1, and AXIN2 genes was investigated using real-time polymerase chain reaction (PCR). CTNNB1 and CDH1 expression levels were unaltered in AP and HP subjects, whereas mRNA expression of APC was decreased in AP contrasted with HP subjects, with a significant association between APC downregulation and polyp size. Although AXIN1 showed no changes between AP and HP groups, a significant association between AXIN1 and dysplasia grade was found. Also, significant upregulation of AXIN2 in both AP and HP subjects was detected. In summary, we have shown increased expression of AXIN2 and decreased expression of APC correlating with grade of dysplasia and polyp size. Hence, AXIN2 and APC should be explored as biomarker candidates for early detection of AP and HP polyps in CRC.

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APC和AXIN2是早期检测腺瘤和增生性息肉的有希望的生物标志物候选物。
WNT/CTNNB1通路的异常激活在结直肠癌(CRC)中是众所周知的。在这里,我们证明了特定的和关键的WNT信号通路基因的表达与伊朗患者群体中结肠腺瘤(AP)和增生性(HP)息肉的疾病进展有关。因此,我们强调潜在的基因表达谱作为早期检测结直肠癌的候选新生物标志物。在一项为期12个月的研究(2016-2017)中,结肠镜检查期间从结直肠息肉患者和10名健康受试者中收集了44份活检样本进行归一化。收集所有病例的临床和人口学资料,采用实时聚合酶链反应(PCR)检测APC、CTNNB1、CDH1、AXIN1和AXIN2基因mRNA表达情况。CTNNB1和CDH1的表达水平在AP和HP组中没有变化,而APC mRNA的表达在AP组中比HP组降低,APC的下调与息肉的大小有显著的相关性。虽然AXIN1在AP组和HP组之间没有变化,但AXIN1与不典型增生等级之间存在显著关联。此外,在AP和HP受试者中均检测到AXIN2的显著上调。总之,我们发现AXIN2的表达增加,APC的表达减少与不典型增生的程度和息肉大小相关。因此,应该探索AXIN2和APC作为早期检测结直肠癌AP和HP息肉的候选生物标志物。
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来源期刊
Cancer Informatics
Cancer Informatics Medicine-Oncology
CiteScore
3.00
自引率
5.00%
发文量
30
审稿时长
8 weeks
期刊介绍: The field of cancer research relies on advances in many other disciplines, including omics technology, mass spectrometry, radio imaging, computer science, and biostatistics. Cancer Informatics provides open access to peer-reviewed high-quality manuscripts reporting bioinformatics analysis of molecular genetics and/or clinical data pertaining to cancer, emphasizing the use of machine learning, artificial intelligence, statistical algorithms, advanced imaging techniques, data visualization, and high-throughput technologies. As the leading journal dedicated exclusively to the report of the use of computational methods in cancer research and practice, Cancer Informatics leverages methodological improvements in systems biology, genomics, proteomics, metabolomics, and molecular biochemistry into the fields of cancer detection, treatment, classification, risk-prediction, prevention, outcome, and modeling.
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