Forecasting COVID-19 pandemic: A data-driven analysis.

IF 5.6
Chaos, solitons, and fractals Pub Date : 2020-10-01 Epub Date: 2020-06-25 DOI:10.1016/j.chaos.2020.110046
Khondoker Nazmoon Nabi
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引用次数: 80

Abstract

In this paper, a new Susceptible-Exposed-Symptomatic Infectious-Asymptomatic Infectious-Quarantined-Hospitalized-Recovered-Dead (SEIDIUQHRD) deterministic compartmental model has been proposed and calibrated for interpreting the transmission dynamics of the novel coronavirus disease (COVID-19). The purpose of this study is to give tentative predictions of the epidemic peak for Russia, Brazil, India and Bangladesh which could become the next COVID-19 hotspots in no time by using a newly developed algorithm based on well-known Trust-region-reflective (TRR) algorithm, which is one of the robust real-time optimization techniques. Based on the publicly available epidemiological data from late January until 10 May, it has been estimated that the number of daily new symptomatic infectious cases for the above mentioned countries could reach the peak around the middle of June with the peak size of  ∼ 15, 774 (95% CI, 12,814-16,734) symptomatic infectious cases in Russia,  ∼ 26, 449 (95% CI, 25,489-31,409) cases in Brazil,  ∼ 9, 504 (95% CI, 8,378-13,630) cases in India and  ∼ 2, 209 (95% CI, 2,078-2,840) cases in Bangladesh if current epidemic trends hold. As of May 11, 2020, incorporating the infectiousness capability of asymptomatic carriers, our analysis estimates the value of the basic reproductive number (R 0) was found to be  ∼ 4.234 (95% CI, 3.764-4.7) in Russia,  ∼ 5.347 (95% CI, 4.737-5.95) in Brazil,  ∼ 5.218 (95% CI, 4.56-5.81) in India,  ∼ 4.649 (95% CI, 4.17-5.12) in the United Kingdom and  ∼ 3.53 (95% CI, 3.12-3.94) in Bangladesh. Moreover, Latin hypercube sampling-partial rank correlation coefficient (LHS-PRCC) which is a global sensitivity analysis (GSA) method has been applied to quantify the uncertainty of our model mechanisms, which elucidates that for Russia, the recovery rate of undetected asymptomatic carriers, the rate of getting home-quarantined or self-quarantined and the transition rate from quarantined class to susceptible class are the most influential parameters, whereas the rate of getting home-quarantined or self-quarantined and the inverse of the COVID-19 incubation period are highly sensitive parameters in Brazil, India, Bangladesh and the United Kingdom which could significantly affect the transmission dynamics of the novel coronavirus disease (COVID-19). Our analysis also suggests that relaxing social distancing restrictions too quickly could exacerbate the epidemic outbreak in the above-mentioned countries.

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预测COVID-19大流行:数据驱动分析。
本文提出了一种新的易感-暴露-有症状感染-无症状感染-隔离-住院-康复-死亡(SEIDIUQHRD)确定性区室模型,用于解释新型冠状病毒病(COVID-19)的传播动力学。本研究的目的是利用基于著名的鲁棒实时优化技术之一Trust-region-reflective (TRR)算法的新算法,对俄罗斯、巴西、印度和孟加拉国可能很快成为下一个COVID-19热点的疫情峰值进行初步预测。根据公开的流行病学数据从一月底到5月10日,据估计,每日新症状感染病例的数量对上述国家可能在6月中旬达到高峰的峰值大小 ∼ 15,774名(95%置信区间,12814 - 16734)有症状感染病例在俄罗斯, ∼ 26岁449例(95%可信区间,25489 - 31409)在巴西, ∼ 9,504例(95%可信区间,8378 - 13630)在印度和 ∼ 2 209(95%可信区间,如果目前的流行趋势持续下去,孟加拉国将出现2,078-2,840例病例。截至2020年5月11日,合并无症状携带者的传染性的能力,我们的分析估计的值基本再生数(0)被发现 ∼ 4.234 (95% CI, 3.764 - -4.7)在俄罗斯, ∼ 5.347 (95% CI, 4.737 - -5.95)在巴西, ∼ 5.218 (95% CI, 4.56 - -5.81)在印度, ∼ 4.649 (95% CI, 4.17 - -5.12)在英国和 ∼ 3.53 (95% CI, 3.12 - -3.94)在孟加拉国。此外,采用拉丁超立方体抽样偏秩相关系数(LHS-PRCC)这一全局敏感性分析(GSA)方法量化了模型机制的不确定性,结果表明,对俄罗斯而言,未被发现的无症状感染者的恢复率、居家隔离率或自我隔离率以及从隔离类到易感类的过渡率是影响最大的参数。而在巴西、印度、孟加拉国和英国,居家隔离率和自我隔离率以及COVID-19潜伏期的反比是高度敏感的参数,可能会对新型冠状病毒病(COVID-19)的传播动态产生重大影响。我们的分析还表明,过快放松社交距离限制可能会加剧上述国家的疫情爆发。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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