Balancing Confounding and Generalizability Using Observational, Real-world Data: 17-gene Genomic Prostate Score Assay Effect on Active Surveillance.

Reviews in urology Pub Date : 2018-01-01 DOI:10.3909/riu0799
Steven Canfield, Michael J Kemeter, Phillip G Febbo, John Hornberger
{"title":"Balancing Confounding and Generalizability Using Observational, Real-world Data: 17-gene Genomic Prostate Score Assay Effect on Active Surveillance.","authors":"Steven Canfield,&nbsp;Michael J Kemeter,&nbsp;Phillip G Febbo,&nbsp;John Hornberger","doi":"10.3909/riu0799","DOIUrl":null,"url":null,"abstract":"<p><p>Randomized, controlled trials can provide high-quality, unbiased evidence for therapeutic interventions but are not always a practical or viable study design for certain healthcare decisions, such as those involving prognostic or predictive testing. Studies using large, real-world databases may be more appropriate and more generalizable to the intended target population of physicians and patients to answer these questions but carry potential for hidden bias. We illustrate several emerging methods of analyzing observational studies using propensity score matching (PSM) and coarsened exact matching (CEM). These advanced statistical methods are intended to reveal a \"hidden experiment\" within an observational database, and so refute or confirm a potential causal effect of assignment to an intervention and study outcome. We applied these methods to the Optum™ Research Database (ORD; Eden Prairie, MN) of electronic health records and administrative claims data to assess the effect of the 17-gene Genomic Prostate Score® (GPS™; Genomic Health, Redwood City, CA) assay on use of active surveillance (AS). In a traditional multivariable logistic regression, the GPS assay increased the use of AS by 29% (95% CI, 24%-33%). Upon applying the matching methods, the effect of the GPS assay on AS use varied between 27% and 80% and the matched data were significant among all algorithms. All matching algorithms performed well in identifying matched data that improved the imbalance in baseline covariates. By using different matching methods to assess causal inference in an observational database, we provide further confidence that the effect of the GPS assay on AS use is statistically significant and unlikely to be a result of confounding due to differences in baseline characteristics of the patients or the settings in which they were seen.</p>","PeriodicalId":21185,"journal":{"name":"Reviews in urology","volume":"20 2","pages":"69-76"},"PeriodicalIF":0.0000,"publicationDate":"2018-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6168323/pdf/RIU020002_069.pdf","citationCount":"8","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Reviews in urology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3909/riu0799","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 8

Abstract

Randomized, controlled trials can provide high-quality, unbiased evidence for therapeutic interventions but are not always a practical or viable study design for certain healthcare decisions, such as those involving prognostic or predictive testing. Studies using large, real-world databases may be more appropriate and more generalizable to the intended target population of physicians and patients to answer these questions but carry potential for hidden bias. We illustrate several emerging methods of analyzing observational studies using propensity score matching (PSM) and coarsened exact matching (CEM). These advanced statistical methods are intended to reveal a "hidden experiment" within an observational database, and so refute or confirm a potential causal effect of assignment to an intervention and study outcome. We applied these methods to the Optum™ Research Database (ORD; Eden Prairie, MN) of electronic health records and administrative claims data to assess the effect of the 17-gene Genomic Prostate Score® (GPS™; Genomic Health, Redwood City, CA) assay on use of active surveillance (AS). In a traditional multivariable logistic regression, the GPS assay increased the use of AS by 29% (95% CI, 24%-33%). Upon applying the matching methods, the effect of the GPS assay on AS use varied between 27% and 80% and the matched data were significant among all algorithms. All matching algorithms performed well in identifying matched data that improved the imbalance in baseline covariates. By using different matching methods to assess causal inference in an observational database, we provide further confidence that the effect of the GPS assay on AS use is statistically significant and unlikely to be a result of confounding due to differences in baseline characteristics of the patients or the settings in which they were seen.

Abstract Image

Abstract Image

使用观察、真实世界数据平衡混淆和泛化:17基因基因组前列腺评分测定对主动监测的影响。
随机对照试验可以为治疗干预提供高质量、无偏见的证据,但对于某些医疗保健决策,例如涉及预后或预测性测试的决策,并不总是实用或可行的研究设计。使用大型真实世界数据库的研究可能更适合医生和患者的预期目标人群来回答这些问题,也更具普遍性,但可能存在潜在的偏见。我们举例说明了使用倾向得分匹配(PSM)和粗化精确匹配(CEM)分析观察性研究的几种新兴方法。这些先进的统计方法旨在揭示观察数据库中的“隐藏实验”,从而反驳或证实干预和研究结果分配的潜在因果影响。我们将这些方法应用于Optum™ 电子健康记录和行政索赔数据的研究数据库(ORD;明尼苏达州伊甸草原),用于评估17基因基因组前列腺评分®(GPS)的影响™; 基因组健康,加利福尼亚州红木市)关于使用主动监测(AS)的测定。在传统的多变量逻辑回归中,GPS测定将AS的使用增加了29%(95%CI,24%-33%)。在应用匹配方法后,GPS测定对AS使用的影响在27%和80%之间变化,并且匹配的数据在所有算法中都是显著的。所有匹配算法在识别匹配数据方面都表现良好,改善了基线协变量的不平衡。通过使用不同的匹配方法来评估观察性数据库中的因果推断,我们进一步相信GPS测定对AS使用的影响具有统计学意义,并且不太可能是由于患者基线特征或就诊环境的差异而造成的混淆结果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信