Labeling Maize (Zea mays L.) Leaves with 15NH4+ and Monitoring Nitrogen Incorporation into Amino Acids by GC/MS Analysis

Q1 Agricultural and Biological Sciences
Caroline Cukier, Peter J. Lea, Rafael Cañas, Anne Marmagne, Anis M. Limami, Bertrand Hirel
{"title":"Labeling Maize (Zea mays L.) Leaves with 15NH4+ and Monitoring Nitrogen Incorporation into Amino Acids by GC/MS Analysis","authors":"Caroline Cukier,&nbsp;Peter J. Lea,&nbsp;Rafael Cañas,&nbsp;Anne Marmagne,&nbsp;Anis M. Limami,&nbsp;Bertrand Hirel","doi":"10.1002/cppb.20073","DOIUrl":null,"url":null,"abstract":"<p>The human body contains approximately 3.2% nitrogen (N), mainly present as protein and amino acids. Although N exists at a high concentration (78%) in the air, it is not readily available to animals and most plants. Plants are however able to take up both nitrate (NO<sub>3</sub><sup>−</sup>) and ammonium (NH<sub>4</sub><sup>+</sup>) ions from the soil and convert them to amino acids and proteins, which are excellent sources for all animals. Most N is available as the stable isotope <sup>14</sup>N, but a second form, <sup>15</sup>N, is present in very low concentrations. <sup>15</sup>N can be detected in extracts of plants by gas chromatography followed by mass spectrometry (GC/MS). In this protocol, the methods are described for tracing the pathway by which plants are able to take up <sup>15</sup>N-labeled nitrate and ammonium and convert them into amino acids and proteins. A protocol for extracting and quantifying amino acids and <sup>15</sup>N enrichment in maize (<i>Zea mays</i> L.) leaves labeled with <sup>15</sup>NH<sub>4</sub><sup>+</sup> is described. Following amino acid extraction, purification, and separation by GC/MS, a calculation of the <sup>15</sup>N enrichment of each amino acid is carried out on a relative basis to identify any differences in the dynamics of amino acid accumulation. This will allow a study of the impact of genetic modifications or mutations on key reactions involved in primary nitrogen and carbon metabolism. © 2018 by John Wiley &amp; Sons, Inc.</p>","PeriodicalId":10932,"journal":{"name":"Current protocols in plant biology","volume":"3 3","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2018-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/cppb.20073","citationCount":"7","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current protocols in plant biology","FirstCategoryId":"1085","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/cppb.20073","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
引用次数: 7

Abstract

The human body contains approximately 3.2% nitrogen (N), mainly present as protein and amino acids. Although N exists at a high concentration (78%) in the air, it is not readily available to animals and most plants. Plants are however able to take up both nitrate (NO3) and ammonium (NH4+) ions from the soil and convert them to amino acids and proteins, which are excellent sources for all animals. Most N is available as the stable isotope 14N, but a second form, 15N, is present in very low concentrations. 15N can be detected in extracts of plants by gas chromatography followed by mass spectrometry (GC/MS). In this protocol, the methods are described for tracing the pathway by which plants are able to take up 15N-labeled nitrate and ammonium and convert them into amino acids and proteins. A protocol for extracting and quantifying amino acids and 15N enrichment in maize (Zea mays L.) leaves labeled with 15NH4+ is described. Following amino acid extraction, purification, and separation by GC/MS, a calculation of the 15N enrichment of each amino acid is carried out on a relative basis to identify any differences in the dynamics of amino acid accumulation. This will allow a study of the impact of genetic modifications or mutations on key reactions involved in primary nitrogen and carbon metabolism. © 2018 by John Wiley & Sons, Inc.

标签玉米(Zea mays L.)15NH4+处理叶片及氨基酸中氮的GC/MS分析
人体含有约3.2%的氮(N),主要以蛋白质和氨基酸的形式存在。虽然空气中氮的浓度很高(78%),但动物和大多数植物不易获得氮。然而,植物能够从土壤中吸收硝酸盐(NO3−)和铵离子(NH4+),并将它们转化为氨基酸和蛋白质,这是所有动物的极好来源。大多数氮以稳定同位素14N的形式存在,但第二种形式15N的浓度很低。采用气相色谱-质谱联用技术(GC/MS)检测植物提取物中的15N。在本协议中,描述了追踪植物能够吸收15n标记的硝酸盐和铵并将其转化为氨基酸和蛋白质的途径的方法。介绍了用15NH4+标记玉米(Zea mays L.)叶片中氨基酸和15N富集的提取和定量方法。通过GC/MS提取、纯化和分离氨基酸后,计算每个氨基酸的15N富集量,以确定氨基酸积累动态的差异。这将允许研究基因修饰或突变对涉及初级氮和碳代谢的关键反应的影响。©2018 by John Wiley &儿子,Inc。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Current protocols in plant biology
Current protocols in plant biology Agricultural and Biological Sciences-Plant Science
自引率
0.00%
发文量
0
期刊介绍: Sound and reproducible laboratory methods are the foundation of scientific discovery. Yet nuances that are critical for an experiment''s success are not captured in the primary literature but exist only as part of a lab''s oral tradition. Current Protocols in Plant Biology provides reproducible step-by-step instructions for protocols relevant to plant research. Furthermore, Current Protocols content is thoughtfully organized by topic for optimal usage and to maximize contextual knowledge. Quarterly issues allow Current Protocols in Plant Biology to constantly evolve to keep pace with the newest discoveries and developments. Current Protocols in Plant Biology is the comprehensive source for protocols in the multidisciplinary field of plant biology, providing an extensive range of protocols from basic to cutting edge. Coverage includes: Extraction and analysis of DNA, RNA, proteins Chromosome analysis Transcriptional analysis Protein expression Metabolites Plant enzymology Epigenetics Plant genetic transformation Mutagenesis Arabidopsis, Maize, Poplar, Rice, and Soybean, and more.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信