[Establishment of LAMP Detection for Toxoplasma gondii Based on the 529 bp Repeat Sequence].

Qian-ming Xu, Heng-qing Yuan, Chang-cheng Zhao, Fen Fang, Zhe Liu, Hong-rui Ning, Da-li Shi, Yu Li, Hai-yang Wang
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Abstract

Objective: To establish the loop mediated isothermal amplification(LAMP) technique for determining Toxoplama gondii.

Methods: The primers for LAMP of the conserved 529 bp sequence was designed by the Primer Explorer 4.0 software. The LAMP reaction was made on the constructed pMD-19T-529 bp recombinant plasmid as a template, and was optimized in loop primer, concentrations of betaine and MgSO4, and reaction temperature. The optimized LAMP and PCR were performed in ultra-pure water, on pig genome, Cryptosporidium parvum genome, Isospora suis genome, and pMD-19T-529 bp, respectively, to test the sensitivity of LAMP. The pMD-19T-529 bp was serially diluted to 109-100 copies/ml to test the specificity of LAMP.

Results: LAMP using the designed primers amplified the 529 bp fragment of T. gondii. The optimized LAMP system had a total reaction volume of 25 μl, with the optimal concentrations of betaine and MgSO4 being 0.4 mol/L and 6 mmol/L, respectively. The amplification efficiency of 30 min reaction in the presence of loop primer was comparable to that of 60 min reaction without loop primer, which indicated that addition of loop primer shortened the reaction time by 30 min. The optimal reaction condition was 63 ℃ 30 min, 80 ℃ 3 min. The established LAMP method specifically amplifed the 529 bp fragment of T. gondii, and its efficiency was 10 times of PCR(detection threshold 103 copies/ml vs. 104 copies/ml).

Conclusion: The established LAMP for detecting Toxoplama gondii 529 bp repeat sequence shows high specificity and sensitivity.

基于529 bp重复序列的刚地弓形虫LAMP检测方法的建立
目的:建立环介导等温扩增(LAMP)检测刚地弓形虫的方法。方法:采用Primer Explorer 4.0软件设计529bp保守序列的LAMP引物。以构建的pmd - 19t - 529bp重组质粒为模板进行LAMP反应,并对环引物、甜菜碱和MgSO4浓度、反应温度进行优化。优化后的LAMP和PCR分别在超纯水中、猪基因组、细小隐孢子虫基因组、猪异孢子虫基因组和pMD-19T-529 bp上进行检测,以检验LAMP的敏感性。将pmd - 19t - 529bp连续稀释至109-100拷贝/ml,检测LAMP特异性。结果:LAMP利用设计的引物扩增出529bp的弓形虫片段。优化后的LAMP体系总反应体积为25 μl,甜菜碱和MgSO4的最佳浓度分别为0.4 mol/L和6 mmol/L。环状引物存在时反应30 min的扩增效率与不存在环状引物时反应60 min的扩增效率相当,说明环状引物的加入使反应时间缩短了30 min。最佳反应条件为63℃30 min、80℃3 min。建立的LAMP方法特异性扩增出弓形虫529 bp片段,效率为PCR的10倍(检测阈值103 copies/ml vs. 104 copies/ml)。结论:建立的LAMP检测刚地弓形虫529bp重复序列具有较高的特异性和敏感性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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