Metabolite extraction for high-throughput FTICR-MS-based metabolomics of grapevine leaves

Q4 Biochemistry, Genetics and Molecular Biology
Marisa Maia , Filipa Monteiro , Mónica Sebastiana , Ana Patrícia Marques , António E.N. Ferreira , Ana Ponces Freire , Carlos Cordeiro , Andreia Figueiredo , Marta Sousa Silva
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引用次数: 34

Abstract

In metabolomics there is an ever-growing need for faster and more comprehensive analysis methods to cope with the increase of biological studies. Direct infusion Fourier-transform ion cyclotron-resonance mass spectrometry (DI-FTICR-MS) is used in non-targeted metabolomics to obtain high-resolution snapshots of the metabolic state of a system. In any metabolic profiling study, the establishment of an effective metabolite extraction protocol is paramount. We developed an improved metabolite extraction method, compatible with DI-FTICR-MS-based metabolomics, using grapevine leaves. This extraction protocol allowed the extraction of polar and non-polar compounds, covering all major classes found in plants and increasing metabolome coverage.

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基于fticr - ms的葡萄叶片代谢组学的高通量代谢产物提取
在代谢组学中,越来越需要更快、更全面的分析方法来应对不断增加的生物学研究。直接输注傅立叶变换离子回旋共振质谱(DI-FTICR-MS)用于非靶向代谢组学,以获得系统代谢状态的高分辨率快照。在任何代谢分析研究中,建立有效的代谢物提取方案是至关重要的。我们开发了一种改进的代谢物提取方法,与基于di - fticr - ms的代谢组学相兼容。该提取方案允许提取极性和非极性化合物,涵盖植物中发现的所有主要类别,并增加代谢组的覆盖范围。
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来源期刊
EuPA Open Proteomics
EuPA Open Proteomics Biochemistry, Genetics and Molecular Biology-Biochemistry
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