{"title":"On \"A mutual information estimator with exponentially decaying bias\" by Zhang and Zheng.","authors":"Jialin Zhang, Chen Chen","doi":"10.1515/sagmb-2018-0005","DOIUrl":null,"url":null,"abstract":"<p><p>Zhang, Z. and Zheng, L. (2015): \"A mutual information estimator with exponentially decaying bias,\" Stat. Appl. Genet. Mol. Biol., 14, 243-252, proposed a nonparametric estimator of mutual information developed in entropic perspective, and demonstrated that it has much smaller bias than the plugin estimator yet with the same asymptotic normality under certain conditions. However it is incorrectly suggested in their article that the asymptotic normality could be used for testing independence between two random elements on a joint alphabet. When two random elements are independent, the asymptotic distribution of $\\sqrt{n}$n-normed estimator degenerates and therefore the claimed normality does not hold. This article complements Zhang and Zheng by establishing a new chi-square test using the same entropic statistics for mutual information being zero. The three examples in Zhang and Zheng are re-worked using the new test. The results turn out to be much more sensible and further illustrate the advantage of the entropic perspective in statistical inference on alphabets. More specifically in Example 2, when a positive mutual information is known to exist, the new test detects it but the log likelihood ratio test fails to do so.</p>","PeriodicalId":49477,"journal":{"name":"Statistical Applications in Genetics and Molecular Biology","volume":"17 2","pages":""},"PeriodicalIF":0.9000,"publicationDate":"2018-03-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1515/sagmb-2018-0005","citationCount":"3","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Statistical Applications in Genetics and Molecular Biology","FirstCategoryId":"100","ListUrlMain":"https://doi.org/10.1515/sagmb-2018-0005","RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Mathematics","Score":null,"Total":0}
引用次数: 3
Abstract
Zhang, Z. and Zheng, L. (2015): "A mutual information estimator with exponentially decaying bias," Stat. Appl. Genet. Mol. Biol., 14, 243-252, proposed a nonparametric estimator of mutual information developed in entropic perspective, and demonstrated that it has much smaller bias than the plugin estimator yet with the same asymptotic normality under certain conditions. However it is incorrectly suggested in their article that the asymptotic normality could be used for testing independence between two random elements on a joint alphabet. When two random elements are independent, the asymptotic distribution of $\sqrt{n}$n-normed estimator degenerates and therefore the claimed normality does not hold. This article complements Zhang and Zheng by establishing a new chi-square test using the same entropic statistics for mutual information being zero. The three examples in Zhang and Zheng are re-worked using the new test. The results turn out to be much more sensible and further illustrate the advantage of the entropic perspective in statistical inference on alphabets. More specifically in Example 2, when a positive mutual information is known to exist, the new test detects it but the log likelihood ratio test fails to do so.
期刊介绍:
Statistical Applications in Genetics and Molecular Biology seeks to publish significant research on the application of statistical ideas to problems arising from computational biology. The focus of the papers should be on the relevant statistical issues but should contain a succinct description of the relevant biological problem being considered. The range of topics is wide and will include topics such as linkage mapping, association studies, gene finding and sequence alignment, protein structure prediction, design and analysis of microarray data, molecular evolution and phylogenetic trees, DNA topology, and data base search strategies. Both original research and review articles will be warmly received.