Using the Arabidopsis Information Resource (TAIR) to Find Information About Arabidopsis Genes

Q1 Biochemistry, Genetics and Molecular Biology

Current protocols in bioinformatics Pub Date : 2017-12-08 DOI:10.1002/cpbi.36

Leonore Reiser, Shabari Subramaniam, Donghui Li, Eva Huala

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引用次数: 54

Abstract

The Arabidopsis Information Resource (TAIR; http://arabidopsis.org) is a comprehensive Web resource of Arabidopsis biology for plant scientists. TAIR curates and integrates information about genes, proteins, gene function, orthologs, gene expression, mutant phenotypes, biological materials such as clones and seed stocks, genetic markers, genetic and physical maps, genome organization, images of mutant plants, protein sub-cellular localizations, publications, and the research community. The various data types are extensively interconnected and can be accessed through a variety of Web-based search and display tools. This unit primarily focuses on some basic methods for searching, browsing, visualizing, and analyzing information about Arabidopsis genes and genome. Additionally, we describe how members of the community can share data using TAIR's Online Annotation Submission Tool (TOAST), in order to make their published research more accessible and visible. © 2017 by John Wiley & Sons, Inc.

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利用拟南芥信息资源(TAIR)查找拟南芥基因信息

拟南芥信息资源;http://arabidopsis.org)是一个面向植物科学家的拟南芥生物学综合资源网站。TAIR管理和整合有关基因、蛋白质、基因功能、同源物、基因表达、突变表型、生物材料(如克隆和种子库存)、遗传标记、遗传和物理图谱、基因组组织、突变植物图像、蛋白质亚细胞定位、出版物和研究社区的信息。各种数据类型广泛地相互连接，并且可以通过各种基于web的搜索和显示工具进行访问。本单元主要介绍拟南芥基因和基因组信息的搜索、浏览、可视化和分析的一些基本方法。此外，我们描述了社区成员如何使用TAIR的在线注释提交工具(TOAST)共享数据，以使他们发表的研究更容易访问和可见。©2017 by John Wiley &儿子,Inc。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

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Current protocols in bioinformatics Biochemistry, Genetics and Molecular Biology-Biochemistry

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