Permanent Draft Genome sequence for Frankia sp. strain CcI49, a Nitrogen-Fixing Bacterium Isolated from Casuarina cunninghamiana that Infects Elaeagnaceae.

Journal of Genomics Pub Date : 2017-09-12 eCollection Date: 2017-01-01 DOI:10.7150/jgen.22138

Samira Mansour, Erik Swanson, Zakkary McNutt, Céline Pesce, Kelsey Harrington, Feseha Abebe-Alele, Stephen Simpson, Krystalynne Morris, W Kelley Thomas, Louis S Tisa

引用次数: 6

Abstract

Frankia sp. strain CcI49 was isolated from Casuarina cunninghamiana nodules. However the strain was unable to re-infect Casuarina, but was able to infect other actinorhizal plants including Elaeagnaceae. Here, we report the 9.8-Mbp draft genome sequence of Frankia sp. strain CcI49 with a G+C content of 70.5 % and 7,441 candidate protein-encoding genes. Analysis of the genome revealed the presence of a bph operon involved in the degradation of biphenyls and polychlorinated biphenyls.

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从木麻黄中分离的固氮细菌Frankia sp.菌株CcI49的永久基因组序列草图。

从木麻黄根瘤中分离到Frankia sp. CcI49菌株。然而，该菌株不能再感染木麻黄，但能够感染其他放线根植物，包括Elaeagnaceae。本文报道了G+C含量为70.5%的Frankia sp.菌株CcI49的9.8 mbp基因组草图序列和7,441个候选蛋白编码基因。基因组分析揭示了bph操纵子参与降解联苯和多氯联苯的存在。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

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来源期刊

Journal of Genomics

自引率

0.00%

发文量

审稿时长

12 weeks

期刊介绍： Journal of Genomics publishes papers of high quality in all areas of gene, genetics, genomics, proteomics, metabolomics, DNA/RNA, computational biology, bioinformatics, and other relevant areas of research and application. Articles published by the journal are rigorously peer-reviewed. Types of articles include: Research paper, Short research communication, Review or mini-reviews, Commentary, Database, Software.