Hydrogel formation by multivalent IDPs: A reincarnation of the microtrabecular lattice?

Peter Tompa
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引用次数: 9

Abstract

Based on high-voltage electron microscopic (HVEM) data of fixed cultured cells, an elaborate three-dimensional network of filaments, including and interconnecting other elements of the cytoskeleton, was observed in cells some half a century ago. Despite many attempts and comparative studies, this "microtrabecular lattice" (MTL) of the cytoplasmic ground substance could not be established as a genuine component of the eukaryotic cell, and is mostly considered today as a sample-preparation artifact of protein adherence and cross-linking to the cytoskeleton. Here we elaborate on the provocative idea that recent observations of hydrogel-forming phase transitions of repetitive regions of intrinsically disordered proteins (IDPs) bear resemblance in creation, organization and physical appearance to the MTL. We review this phenomenon in detail, and suggest that phase transitions of actin regulatory proteins, neurofilament side-arms and other proteins could generate non-uniform spatial distribution of cytoplasmic material in the vicinity of the cytoskeleton that might even give rise to fixation phenomena resembling the MTL. Whether such hydrogel formation by IDPs is a general physical phenomenon, will remain to be seen, nevertheless, the underlying organizational principle provokes novel experimental studies to uncover the ensuing higher-level regulation of cell physiology, in which the despised and long-forgotten concept of MTL might give some interesting leads.

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由多价IDPs形成的水凝胶:微小梁晶格的转世?
基于固定培养细胞的高压电子显微镜(HVEM)数据,半个世纪前在细胞中观察到一个精细的三维纤维丝网络,包括细胞骨架的其他元素并相互连接。尽管进行了许多尝试和比较研究,但这种细胞质基质的“微小梁晶格”(MTL)仍不能被确定为真核细胞的真正组成部分,目前主要被认为是蛋白质粘附和与细胞骨架交联的样品制备人工制品。在这里,我们详细阐述了最近观察到的内在无序蛋白(IDPs)重复区域的水凝胶形成相变在创造、组织和物理外观上与MTL相似的观点。我们详细回顾了这一现象,并提出肌动蛋白调节蛋白、神经丝侧臂和其他蛋白质的相变可能在细胞骨架附近产生细胞质物质的不均匀空间分布,甚至可能产生类似MTL的固定现象。这种由IDPs形成的水凝胶是否是一种普遍的物理现象还有待观察,然而,潜在的组织原理激发了新的实验研究,以揭示随后的细胞生理学的更高水平调节,其中被轻视和长期遗忘的MTL概念可能会提供一些有趣的线索。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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