{"title":"The draft genome sequence of the plant growth promoting rhizospheric bacterium Enterobacter cloacae SBP-8","authors":"Rajnish Prakash Singh, Shrayansh Nalwaya, Prabhat Nath Jha","doi":"10.1016/j.gdata.2017.03.006","DOIUrl":null,"url":null,"abstract":"<div><p>Here, we report the draft genome sequence and annotation of plant growth promoting rhizobacterium <em>Enterobacter cloacae</em> SBP-8 isolated from the rhizosphere of <em>Sorghum bicolor</em> L. growing in desert region of Rajasthan, India. From the genome sequences, we identified the genes encoding plant growth promoting properties such as 1-aminocyclopropane-1-carboxylate deaminase (<em>AcdS</em>), phosphate solubilisation, siderophore, and IAA (indole acetic acid) production. The genes encoding different functions required for colonization including motility, chemotaxis, adherence, and secretion system (I, II, IV, VI) were also identified. The complete genome sequence of this bacterium consists of one chromosome (48,54,065<!--> <!-->bp) and one plasmid (85,398). The genome sequence of <em>Enterobacter cloacae</em> SBP-8 was deposited in the Genbank with the accession number <span>CP016906</span><svg><path></path></svg> (chromosome) and CP017413 (plasmid).</p></div>","PeriodicalId":56340,"journal":{"name":"Genomics Data","volume":"12 ","pages":"Pages 81-83"},"PeriodicalIF":0.0000,"publicationDate":"2017-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.gdata.2017.03.006","citationCount":"16","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Genomics Data","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2213596017300508","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 16
Abstract
Here, we report the draft genome sequence and annotation of plant growth promoting rhizobacterium Enterobacter cloacae SBP-8 isolated from the rhizosphere of Sorghum bicolor L. growing in desert region of Rajasthan, India. From the genome sequences, we identified the genes encoding plant growth promoting properties such as 1-aminocyclopropane-1-carboxylate deaminase (AcdS), phosphate solubilisation, siderophore, and IAA (indole acetic acid) production. The genes encoding different functions required for colonization including motility, chemotaxis, adherence, and secretion system (I, II, IV, VI) were also identified. The complete genome sequence of this bacterium consists of one chromosome (48,54,065 bp) and one plasmid (85,398). The genome sequence of Enterobacter cloacae SBP-8 was deposited in the Genbank with the accession number CP016906 (chromosome) and CP017413 (plasmid).
本文报道了从印度拉贾斯坦沙漠地区的双色高粱根际分离的促进植物生长的肠杆菌阴沟肠杆菌SBP-8的基因组序列草图和注释。从基因组序列中，我们确定了编码植物生长促进特性的基因，如1-氨基环丙烷-1-羧酸脱氨酶(AcdS)、磷酸盐溶解、铁载体和IAA(吲哚乙酸)生产。还鉴定了编码定植所需的不同功能的基因，包括运动性、趋化性、粘附性和分泌系统(I, II, IV, VI)。该细菌的全基因组序列由一条染色体(48,54,065 bp)和一个质粒(85,398)组成。将阴沟肠杆菌SBP-8的基因组序列存入Genbank，编号为CP016906(染色体)和CP017413(质粒)。
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