{"title":"Computational Approach to Measuring Myocyte Disarray in Animal Models of Heart Disease","authors":"William Wan, Leslie Leinwand","doi":"10.1002/cphg.35","DOIUrl":null,"url":null,"abstract":"<p>In cardiovascular disease research, studies often include measuring cardiac function and performing histological examination of heart tissue. After measuring contractility, hearts from animals such as mice and rats are often frozen or fixed, sliced, and stained to quantify the morphology of various structures such as extracellular matrix proteins, cell nuclei, and F-actin. Traditional scoring methods have largely consisted of assessing sections of images for the presence or absence of myocyte disarray. These approaches require unbiased manual assessment, which can require extra personnel, and are not scalable to the quantity of data that can be generated by modern automated experimental techniques. Here, we describe an automated image analysis approach for unbiased numerical measurement of myocyte disarray. We provide step-by-step instructions for image preparation as well as a basic Matlab script for measurements. © 2017 by John Wiley & Sons, Inc.</p>","PeriodicalId":40007,"journal":{"name":"Current Protocols in Human Genetics","volume":"93 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2017-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/cphg.35","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current Protocols in Human Genetics","FirstCategoryId":"1085","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/cphg.35","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 1
Abstract
In cardiovascular disease research, studies often include measuring cardiac function and performing histological examination of heart tissue. After measuring contractility, hearts from animals such as mice and rats are often frozen or fixed, sliced, and stained to quantify the morphology of various structures such as extracellular matrix proteins, cell nuclei, and F-actin. Traditional scoring methods have largely consisted of assessing sections of images for the presence or absence of myocyte disarray. These approaches require unbiased manual assessment, which can require extra personnel, and are not scalable to the quantity of data that can be generated by modern automated experimental techniques. Here, we describe an automated image analysis approach for unbiased numerical measurement of myocyte disarray. We provide step-by-step instructions for image preparation as well as a basic Matlab script for measurements. © 2017 by John Wiley & Sons, Inc.
测量心脏疾病动物模型中心肌细胞紊乱的计算方法
在心血管疾病研究中,研究通常包括测量心功能和对心脏组织进行组织学检查。在测量收缩力后,通常将动物(如小鼠和大鼠)的心脏冷冻或固定,切片并染色,以量化各种结构的形态,如细胞外基质蛋白,细胞核和f -肌动蛋白。传统的评分方法主要包括评估图像的部分是否存在肌细胞紊乱。这些方法需要无偏见的人工评估,这可能需要额外的人员,并且无法扩展到现代自动化实验技术可以生成的数据量。在这里,我们描述了一种用于无偏数值测量肌细胞紊乱的自动图像分析方法。我们提供了图像准备的分步说明以及用于测量的基本Matlab脚本。©2017 by John Wiley &儿子,Inc。
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