{"title":"Impact of aspirin on the transcriptome of Streptococcus pneumoniae D39","authors":"Muhammad Afzal , Sulman Shafeeq","doi":"10.1016/j.gdata.2017.02.013","DOIUrl":null,"url":null,"abstract":"<div><p>Aspirin or acetylsalicylic acid (ASA) is a medicine used to treat pain, fever, and inflammation. Here, we for the very first time reported the genome-wide transcriptional profiling of aspirin-regulated genes in <em>Streptococcus pneumoniae</em> in the presence of 5<!--> <!-->mM aspirin in chemically-defined medium (CDM) using microarray analysis. Our results showed that expression of several genes was differentially expressed in the presence of aspirin. These genes were further grouped into COG (Clusters of Orthologous Groups) functional categories based on the putative functions of the corresponding proteins. Most of affected genes belong to COG category E (Amino acid transport and metabolism), G (Carbohydrate transport and metabolism), J (Translation, ribosomal structure and biogenesis), and I (Lipid transport and metabolism). Transcriptional profiling data of aspirin-regulated genes was deposited to Gene Expression Omnibus (GEO) database under accession number <span>GSE94514</span><svg><path></path></svg>.</p></div>","PeriodicalId":56340,"journal":{"name":"Genomics Data","volume":"12 ","pages":"Pages 38-40"},"PeriodicalIF":0.0000,"publicationDate":"2017-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.gdata.2017.02.013","citationCount":"6","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Genomics Data","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2213596017300363","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 6
Abstract
Aspirin or acetylsalicylic acid (ASA) is a medicine used to treat pain, fever, and inflammation. Here, we for the very first time reported the genome-wide transcriptional profiling of aspirin-regulated genes in Streptococcus pneumoniae in the presence of 5 mM aspirin in chemically-defined medium (CDM) using microarray analysis. Our results showed that expression of several genes was differentially expressed in the presence of aspirin. These genes were further grouped into COG (Clusters of Orthologous Groups) functional categories based on the putative functions of the corresponding proteins. Most of affected genes belong to COG category E (Amino acid transport and metabolism), G (Carbohydrate transport and metabolism), J (Translation, ribosomal structure and biogenesis), and I (Lipid transport and metabolism). Transcriptional profiling data of aspirin-regulated genes was deposited to Gene Expression Omnibus (GEO) database under accession number GSE94514.
阿司匹林或乙酰水杨酸(ASA)是一种用于治疗疼痛、发烧和炎症的药物。在这里,我们首次使用微阵列分析报道了在化学定义培养基(CDM)中存在5 mM阿司匹林时肺炎链球菌中阿司匹林调节基因的全基因组转录谱。我们的研究结果表明,在阿司匹林存在的情况下,几个基因的表达存在差异。根据相应蛋白的推测功能,将这些基因进一步归类为COG (Clusters of Orthologous Groups)功能类别。大多数受影响的基因属于COG类E(氨基酸转运和代谢)、G(碳水化合物转运和代谢)、J(翻译、核糖体结构和生物发生)和I(脂质转运和代谢)。将阿司匹林调节基因转录谱数据存入Gene Expression Omnibus (GEO)数据库,登录号为GSE94514。