BFPTool: a software tool for analysis of Biomembrane Force Probe experiments.

Q1 Biochemistry, Genetics and Molecular Biology
BMC Biophysics Pub Date : 2017-02-13 eCollection Date: 2017-01-01 DOI:10.1186/s13628-016-0033-2
Daniel Šmít, Coralie Fouquet, Mohamed Doulazmi, Frédéric Pincet, Alain Trembleau, Martin Zapotocky
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引用次数: 6

Abstract

Background: The Biomembrane Force Probe is an approachable experimental technique commonly used for single-molecule force spectroscopy and experiments on biological interfaces. The technique operates in the range of forces from 0.1 pN to 1000 pN. Experiments are typically repeated many times, conditions are often not optimal, the captured video can be unstable and lose focus; this makes efficient analysis challenging, while out-of-the-box non-proprietary solutions are not freely available.

Results: This dedicated tool was developed to integrate and simplify the image processing and analysis of videomicroscopy recordings from BFP experiments. A novel processing feature, allowing the tracking of the pipette, was incorporated to address a limitation of preceding methods. Emphasis was placed on versatility and comprehensible user interface implemented in a graphical form.

Conclusions: An integrated analytical tool was implemented to provide a faster, simpler and more convenient way to process and analyse BFP experiments.

Abstract Image

Abstract Image

Abstract Image

BFPTool:生物膜力探针实验分析软件工具。
背景:生物膜力探针是一种可接近的实验技术,常用于单分子力谱和生物界面实验。该技术在0.1 pN到1000 pN的力范围内工作。实验通常重复多次,条件往往不是最佳的,捕获的视频可能不稳定和失焦;这使得有效的分析具有挑战性,而开箱即用的非专有解决方案并不是免费提供的。结果:该专用工具用于整合和简化BFP实验视频显微记录的图像处理和分析。一种新的处理特征,允许跟踪移液器,被纳入解决前面方法的限制。重点放在多功能性和易于理解的用户界面实现的图形形式。结论:实现了一种集成分析工具,为BFP实验的处理和分析提供了一种更快、更简单、更方便的方法。
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来源期刊
BMC Biophysics
BMC Biophysics BIOPHYSICS-
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>12 weeks
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