Placental genetic variations in circadian clock-related genes increase the risk of placental abruption.

International journal of molecular epidemiology and genetics Pub Date : 2016-03-23 eCollection Date: 2016-01-01
Chunfang Qiu, Bizu Gelaye, Marie Denis, Mahlet G Tadesse, Daniel A Enquobahrie, Cande V Ananth, Percy N Pacora, Manuel Salazar, Sixto E Sanchez, Michelle A Williams
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Abstract

The genetic architecture of placental abruption (PA) remains poorly understood. We examined variations in SNPs of circadian clock-related genes in placenta with PA risk. We also explored placental and maternal genomic contributions to PA risk. Placental genomic DNA samples were isolated from 280 PA cases and 244 controls. Genotyping was performed using the Illumina Cardio-MetaboChip. We examined 116 SNPs in 13 genes known to moderate circadian rhythms. Logistic regression models were fit to estimate odds ratios (ORs). The combined effect of multiple SNPs on PA risk was estimated using a weighted genetic risk score. We examined independent and joint associations of wGRS derived from placental and maternal genomes with PA. Seven SNPs in five genes (ARNTL2, CRY2, DEC1, PER3 and RORA), in the placental genome, were associated with PA risk. Each copy of the minor allele (G) of a SNP in the RORA gene (rs2899663) was associated with a 30% reduced odds of PA (95% CI 0.52-0.95). The odds of PA increased with increasing placental-wGRS (Ptrend<0.001). The ORs were 1.00, 2.16, 3.24 and 4.48 across quartiles. Associations persisted after the maternal-wGRS was included in the model. There was evidence of an additive contribution of placental and maternal genetic contributions to PA risk. Participants with placental- and maternal-wGRS in the highest quartile, compared with those in the lowest quartile, had a 15.57-fold (95% CI 3.34-72.60) increased odds of PA. Placental variants in circadian clock-related genes are associated with PA risk; and the association persists after control of genetic variants in the maternal genome.

胎盘生物钟相关基因的遗传变异增加了胎盘早剥的风险。
胎盘早剥(PA)的遗传结构仍然知之甚少。我们检测了PA风险胎盘中生物钟相关基因的snp变异。我们还探讨了胎盘和母体基因组对PA风险的影响。从280例PA病例和244例对照组中分离胎盘基因组DNA样本。使用Illumina Cardio-MetaboChip进行基因分型。我们检查了13个已知调节昼夜节律的基因中的116个snp。拟合逻辑回归模型来估计比值比(or)。使用加权遗传风险评分估计多个snp对PA风险的综合影响。我们研究了来自胎盘和母体基因组的wGRS与PA的独立和联合关联。胎盘基因组中5个基因(ARNTL2、CRY2、DEC1、PER3和RORA)的7个snp与PA风险相关。RORA基因(rs2899663)中一个SNP的小等位基因(G)的每个拷贝与PA的几率降低30%相关(95% CI 0.52-0.95)。PA的几率随胎盘- wgrs的增加而增加(p趋势)
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