Fully automatic characterization and data collection from crystals of biological macromolecules.

Olof Svensson, Stéphanie Malbet-Monaco, Alexander Popov, Didier Nurizzo, Matthew W Bowler
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Abstract

Considerable effort is dedicated to evaluating macromolecular crystals at synchrotron sources, even for well established and robust systems. Much of this work is repetitive, and the time spent could be better invested in the interpretation of the results. In order to decrease the need for manual intervention in the most repetitive steps of structural biology projects, initial screening and data collection, a fully automatic system has been developed to mount, locate, centre to the optimal diffraction volume, characterize and, if possible, collect data from multiple cryocooled crystals. Using the capabilities of pixel-array detectors, the system is as fast as a human operator, taking an average of 6 min per sample depending on the sample size and the level of characterization required. Using a fast X-ray-based routine, samples are located and centred systematically at the position of highest diffraction signal and important parameters for sample characterization, such as flux, beam size and crystal volume, are automatically taken into account, ensuring the calculation of optimal data-collection strategies. The system is now in operation at the new ESRF beamline MASSIF-1 and has been used by both industrial and academic users for many different sample types, including crystals of less than 20 µm in the smallest dimension. To date, over 8000 samples have been evaluated on MASSIF-1 without any human intervention.

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生物大分子晶体的全自动表征和数据采集。
在同步辐射源上评估大分子晶体需要投入大量的精力,即使是已经建立起来的强大系统也不例外。这项工作大多是重复性的,而所花费的时间可以更好地用于解释结果。为了减少结构生物学项目中重复性最强的步骤--初步筛选和数据收集--的人工干预需求,我们开发了一套全自动系统,用于安装、定位、中心到最佳衍射体积、表征,并在可能的情况下收集多个低温冷却晶体的数据。利用像素阵列探测器的功能,该系统的速度与人工操作一样快,每个样品平均耗时 6 分钟,具体取决于样品大小和所需的表征水平。该系统使用基于 X 射线的快速程序,在衍射信号最高的位置对样品进行系统定位和对中,并自动考虑通量、光束大小和晶体体积等样品表征的重要参数,确保计算出最佳的数据采集策略。该系统目前在 ESRF 新光束线 MASSIF-1 上运行,已被工业和学术用户用于许多不同类型的样品,包括最小尺寸小于 20 微米的晶体。迄今为止,MASSIF-1 已对 8000 多个样品进行了评估,无需任何人工干预。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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