The biophysical nature of cells: potential cell behaviours revealed by analytical and computational studies of cell surface mechanics.

Q1 Biochemistry, Genetics and Molecular Biology
BMC Biophysics Pub Date : 2015-05-12 eCollection Date: 2015-01-01 DOI:10.1186/s13628-015-0022-x
Ramiro Magno, Verônica A Grieneisen, Athanasius Fm Marée
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引用次数: 71

Abstract

Background: The biophysical characteristics of cells determine their shape in isolation and when packed within tissues. Cells can form regular or irregular epithelial structures, round up and form clusters, or deform and attach to substrates. The acquired shape of cells and tissues is a consequence of (i) internal cytoskeletal processes, such as actin polymerisation and cortical myosin contraction, (ii) adhesion molecules within the cell membrane that interact with substrates and neighbouring cells, and (iii) processes that regulate cell volume. Although these processes seem relatively simple, when combined they unleash a rich variety of cellular behaviour that is not readily understandable outside a theoretical framework.

Methods: We perform a mathematical analysis of a commonly used class of model formalisms that describe cell surface mechanics using an energy-based approach. Predictions are then confirmed through comparison with the computational outcomes of a Vertex model and 2D and 3D simulations of the Cellular Potts model.

Results: The analytical study reveals the complete possible spectrum of single cell behaviour and tissue packing in both 2D and 3D, by taking the typical core elements of cell surface mechanics into account: adhesion, cortical tension and volume conservation. We show that from an energy-based description, forces and tensions can be derived, as well as the prediction of cell behaviour and tissue packing, providing an intuitive and biologically relevant mapping between modelling parameters and experiments.

Conclusions: The quantitative cellular behaviours and biological insights agree between the analytical study and the diverse computational model formalisms, including the Cellular Potts model. This illustrates the generality of energy-based approaches for cell surface mechanics and highlights how meaningful and quantitative comparisons between models can be established. Moreover, the mathematical analysis reveals direct links between known biophysical properties and specific parameter settings within the Cellular Potts model.

Abstract Image

Abstract Image

Abstract Image

细胞的生物物理性质:细胞表面力学的分析和计算研究揭示的潜在细胞行为。
背景:细胞的生物物理特性决定了它们在分离时和在组织内包装时的形状。细胞可以形成规则或不规则的上皮结构,聚集成簇,或变形并附着在底物上。细胞和组织的获得形状是以下过程的结果:(i)内部细胞骨架过程,如肌动蛋白聚合和皮质肌球蛋白收缩,(ii)细胞膜内与底物和邻近细胞相互作用的粘附分子,以及(iii)调节细胞体积的过程。虽然这些过程看起来相对简单,但当它们结合在一起时,就会释放出丰富多样的细胞行为,这些行为在理论框架之外很难理解。方法:我们对常用的一类模型形式进行数学分析,这些模型形式使用基于能量的方法描述细胞表面力学。然后通过与Vertex模型和Cellular Potts模型的2D和3D模拟的计算结果进行比较来确认预测。结果:通过考虑细胞表面力学的典型核心要素:粘附、皮质张力和体积守恒,分析研究揭示了二维和三维单细胞行为和组织填充的完整可能谱。我们表明,从基于能量的描述中,可以推导出力和张力,以及细胞行为和组织包装的预测,在建模参数和实验之间提供直观和生物学相关的映射。结论:定量细胞行为和生物学见解在分析研究和各种计算模型形式(包括cellular Potts模型)之间是一致的。这说明了基于能量的细胞表面力学方法的普遍性,并强调了如何在模型之间建立有意义和定量的比较。此外,数学分析揭示了已知生物物理特性与Cellular Potts模型中特定参数设置之间的直接联系。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
BMC Biophysics
BMC Biophysics BIOPHYSICS-
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审稿时长
>12 weeks
期刊介绍: Cessation
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