Comparison of QSAR models based on combinations of genetic algorithm, stepwise multiple linear regression, and artificial neural network methods to predict Kd of some derivatives of aromatic sulfonamides as carbonic anhydrase II inhibitors.

Bioorganicheskaia khimiia Pub Date : 2014-01-01
Afshin Maleki, Hiua Daraei, Loghman Alaei, Aram Faraji
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Abstract

Four stepwise multiple linear regressions (SMLR) and a genetic algorithm (GA) based multiple linear regressions (MLR), together with artificial neural network (ANN) models, were applied for quantitative structure-activity relationship (QSAR) modeling of dissociation constants (Kd) of 62 arylsulfonamide (ArSA) derivatives as human carbonic anhydrase II (HCA II) inhibitors. The best subsets of molecular descriptors were selected by SMLR and GA-MLR methods. These selected variables were used to generate MLR and ANN models. The predictability power of models was examined by an external test set and cross validation. In addition, some tests were done to examine other aspects of the models. The results show that for certain purposes GA-MLR is better than SMLR and for others, ANN overcomes MLR models.

基于遗传算法、逐步多元线性回归和人工神经网络方法联合预测芳香磺胺类碳酸酐酶II抑制剂衍生物Kd的QSAR模型比较
采用4种逐步多元线性回归(SMLR)和基于遗传算法(GA)的多元线性回归(MLR),结合人工神经网络(ANN)模型,对62种ArSA衍生物作为人碳酸酐酶II (HCA II)抑制剂的解离常数(Kd)进行定量构效关系(QSAR)建模。采用SMLR和GA-MLR两种方法筛选出最佳的分子描述子子集。这些选定的变量被用来生成MLR和ANN模型。通过外部测试集和交叉验证来检验模型的可预测性。此外,还进行了一些测试来检查模型的其他方面。结果表明,对于某些目的,GA-MLR优于SMLR,而对于其他目的,ANN则优于MLR模型。
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