Fish mapping of 250 cosmid and 26 YAC clones to chromosome 4 with special emphasis on the FSHD region at 4q35.

Muscle & nerve. Supplement Pub Date : 1995-01-01
C Wijmenga, H G Dauwerse, G W Padberg, N Meyer, J C Murray, K Mills, G B van Ommen, M H Hofker, R R Frants
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Abstract

Facioscapulohumeral muscular dystrophy (FSHD) is located on chromosome 4q35, close to the telomere. FSHD patients carry deletions within a cluster of tandemly repeated DNA. Although expression of a functional FSHD gene will be altered in patients, the sequence itself may be unaffected by this deletion. Hence, the FSHD gene could lie outside of the deleted region. This study employs fluorescent in situ hybridization using chromosome 4-specific cosmid and YAC clones to rapidly saturate chromosome 4 with new markers. Some 250 cosmids and 26 YACs were regionally mapped, of which 5 YACs and 55 cosmids mapped to the distal portion of 4q. Only one of these clones (D4S1454) mapped telomerically to a translocation breakpoint specified by D4S187. Using two-color interphase mapping, the following marker order was obtained: Cen-D4S187-D4S1454-HSPCAL2-D4S163-D4S139-D4F35S1. Absence of additional markers mapping distal to D4F35S1 indicates that the linkage group containing the FSHD gene lies extremely close to the 4q telomere.

将250个cosmid和26个YAC克隆定位到4号染色体上,特别强调了4q35的FSHD区域。
面肩肱骨肌营养不良症(FSHD)位于染色体4q35上,靠近端粒。FSHD患者在一组串联重复的DNA中携带缺失。虽然功能性FSHD基因的表达会在患者中发生改变,但序列本身可能不会受到这种缺失的影响。因此,FSHD基因可能位于缺失区域之外。本研究利用4号染色体特异性的cosmid和YAC克隆进行荧光原位杂交,使4号染色体快速饱和新的标记。共定位了250个cosmid和26个yac,其中5个yac和55个cosmid位于4q的远端。这些克隆中只有一个(D4S1454)将端粒映射到D4S187指定的易位断点。采用双色间期作图,得到的标记顺序为:Cen-D4S187-D4S1454-HSPCAL2-D4S163-D4S139-D4F35S1。缺少D4F35S1远端的额外标记表明含有FSHD基因的连锁组非常靠近4q端粒。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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