A critical analysis of dipole-moment calculations as obtained from experimental and theoretical structure factors.

IF 1.8 4区 材料科学
Acta Crystallographica Section A Pub Date : 2012-11-01 Epub Date: 2012-10-05 DOI:10.1107/S0108767312034010
Agnieszka Poulain-Paul, Ayoub Nassour, Christian Jelsch, Benoit Guillot, Maciej Kubicki, Claude Lecomte
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引用次数: 16

Abstract

Three models of charge-density distribution - Hansen-Coppens multipolar, virtual atom and kappa - of different complexities, different numbers of refined parameters, and with variable levels of restraints, were tested against theoretical and high-resolution X-ray diffraction structure factors for 2-methyl-4-nitro-1-phenyl-1H-imidazole-5-carbonitrile. The influence of the model, refinement strategy, multipole level and treatment of the H atoms on the dipole moment was investigated. The dipole moment turned out to be very sensitive to the refinement strategy. Also, small changes in H-atom treatment can greatly influence the calculated magnitude and orientation of the dipole moment. The best results were obtained when H atoms were kept in positions determined by neutron diffraction and anisotropic displacement parameters (obtained by SHADE, in this case) were used. Also, constraints on kappa values of H atoms were found to be superior to the free refinement of these parameters. It is also shown that the over-parametrization of the multipolar model, although possibly leading to better residuals, in general gives worse dipole moments.

从实验和理论结构因素得到的偶极矩计算的关键分析。
采用理论和高分辨率x射线衍射结构因子对3 -甲基-4-硝基-1-苯基- 1h -咪唑-5-碳腈的3种电荷密度分布模型——Hansen-Coppens多极模型、虚拟原子模型和kappa模型进行了测试,这些模型具有不同的复杂性、不同的细化参数数和不同的约束水平。研究了模型、精化策略、多极能级和氢原子处理对偶极矩的影响。结果表明,偶极矩对改进策略非常敏感。此外,h原子处理的微小变化也会极大地影响偶极矩的计算大小和取向。当H原子保持在由中子衍射确定的位置,并使用各向异性位移参数(在这种情况下由SHADE获得)时,获得了最好的结果。同时,对H原子kappa值的约束优于这些参数的自由细化。研究还表明,多极模型的过度参数化虽然可能导致更好的残差,但通常会产生更差的偶极矩。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
自引率
11.10%
发文量
0
审稿时长
3 months
期刊介绍: Acta Crystallographica Section A: Foundations and Advances publishes articles reporting advances in the theory and practice of all areas of crystallography in the broadest sense. As well as traditional crystallography, this includes nanocrystals, metacrystals, amorphous materials, quasicrystals, synchrotron and XFEL studies, coherent scattering, diffraction imaging, time-resolved studies and the structure of strain and defects in materials. The journal has two parts, a rapid-publication Advances section and the traditional Foundations section. Articles for the Advances section are of particularly high value and impact. They receive expedited treatment and may be highlighted by an accompanying scientific commentary article and a press release. Further details are given in the November 2013 Editorial. The central themes of the journal are, on the one hand, experimental and theoretical studies of the properties and arrangements of atoms, ions and molecules in condensed matter, periodic, quasiperiodic or amorphous, ideal or real, and, on the other, the theoretical and experimental aspects of the various methods to determine these properties and arrangements.
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