Crystallization and preliminary X-ray diffraction analysis of a novel type of phosphoserine phosphatase from Hydrogenobacter thermophilus TK-6.

IF 0.9 4区 生物学
Yoko Chiba, Shoichiro Horita, Jun Ohtsuka, Hiroyuki Arai, Koji Nagata, Yasuo Igarashi, Masaru Tanokura, Masaharu Ishii
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引用次数: 1

Abstract

Two novel-type phosphoserine phosphatases (PSPs) with unique substrate specificity from the thermophilic and hydrogen-oxidizing bacterium Hydrogenobacter thermophilus TK-6 have previously been identified. Here, one of the PSPs (iPSP1) was heterologously expressed in Escherichia coli, purified and crystallized. Diffraction-quality crystals were obtained by the sitting-drop vapour-diffusion method using PEG 4000 as the precipitant. Two diffraction data sets with resolution ranges of 45.0-2.50 and 45.0-1.50 Å were collected from a single crystal and were merged to give a highly complete data set. The space group of the crystal was identified as primitive orthorhombic P2(1)2(1)2(1), with unit-cell parameters a = 49.8, b = 73.6, c = 124.3 Å. The calculated Matthews coefficient (V(M) = 2.32 Å(3) Da(-1)) indicated that the crystal contained one iPSP1 complex per asymmetric unit.

一种新型嗜热氢杆菌TK-6磷酸丝氨酸磷酸酶的结晶和初步x射线衍射分析。
从嗜热和氧化氢的嗜热氢杆菌TK-6中鉴定出两种具有独特底物特异性的新型磷酸丝氨酸磷酸酶(PSPs)。其中一种PSPs (iPSP1)在大肠杆菌中异种表达,纯化并结晶。以PEG 4000为沉淀剂,采用坐滴气相扩散法获得了衍射质量的晶体。从单晶中采集了分辨率分别为45.0-2.50和45.0-1.50 Å的两个衍射数据集,并进行合并,得到了一个高度完整的数据集。晶体的空间群为原始正交P2(1)2(1)2(1),晶胞参数a = 49.8, b = 73.6, c = 124.3 Å。计算得到的Matthews系数(V(M) = 2.32 Å(3) Da(-1))表明该晶体每个不对称单元含有一个iPSP1配合物。
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审稿时长
2-4 weeks
期刊介绍: Acta Crystallographica Section F is a rapid structural biology communications journal. Articles on any aspect of structural biology, including structures determined using high-throughput methods or from iterative studies such as those used in the pharmaceutical industry, are welcomed by the journal. The journal offers the option of open access, and all communications benefit from unlimited free use of colour illustrations and no page charges. Authors are encouraged to submit multimedia content for publication with their articles. Acta Cryst. F has a dedicated online tool called publBio that is designed to make the preparation and submission of articles easier for authors.
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