Direct phasing from Patterson syntheses by δ recycling.

IF 1.8 4区 材料科学
Acta Crystallographica Section A Pub Date : 2012-01-01 Epub Date: 2011-11-17 DOI:10.1107/S0108767311043145
Jordi Rius
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引用次数: 13

Abstract

The direct methods origin-free modulus sum function [Rius (1993). Acta Cryst. A49, 406-409] includes in its definition the structure factor G(Φ) of the squared crystal structure expressed in terms of Φ, the set of φ phases of the normalized structure factors E's of the crystal structure of unit-cell volume V. Here the simpler sum function variant S'(P) = ∑(H)E(-H)∫(V)δ(P,Δ)(Φ)exp(i2πHr)dV extended over all H reflections is introduced which involves no G's and in which the δ(P,Δ) function corresponds to δ(P) = FT(-1){(E(2)(H) - )exp[iφ(H)(Φ)]} (where FT = Fourier transform) with all values smaller than Δ = 2.5σ(P) equated to zero (σ(2)(P) is the variance of δ(P) calculable from the experimental intensities). The new phase estimates are obtained by Fourier transforming δ(P,Δ). This iterative phasing method (δ recycling) only requires calculation of Fourier transforms at two stages. Since δ(M) ≃ δ(P)/2, similar arguments are valid for δ(M) = FT(-1)[(E(H) - )exp(iφ(H))] from which the corresponding S'(M) phasing function follows.

δ循环从帕特森合成中直接相化。
直接法无原点模和函数[Rius(1993)]。Acta结晶。A49, 406-409]在其定义中包含以Φ表示的晶体结构平方的结构因子G(Φ),φ的阶段的规范化结构因素E的晶体结构的单胞体积V .这里的简单求和功能变体年代(P) =∑(H) E (- H)∫(V)δ(P,Δ)(Φ)exp (i2πHr) dV延长所有H反射介绍涉及没有G的δ(P,Δ)函数对应于δ(P) =英尺(1){(E (2) (H) -) exp(我φ(H)(Φ)]}(英尺=傅里叶变换)和所有的值小于Δ= 2.5σ(P)等同于零(σ(2)(P)的方差是δ(P)从实验计算强度)。新的相位估计是通过傅里叶变换δ(P,Δ)得到的。这种迭代相位法(δ循环)只需要计算两个阶段的傅里叶变换。由于δ(M)≃δ(P)/2,对于δ(M) = FT(-1)[(E(H) -)exp(iφ(H))],可以得到相应的S′(M)相位函数。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
自引率
11.10%
发文量
0
审稿时长
3 months
期刊介绍: Acta Crystallographica Section A: Foundations and Advances publishes articles reporting advances in the theory and practice of all areas of crystallography in the broadest sense. As well as traditional crystallography, this includes nanocrystals, metacrystals, amorphous materials, quasicrystals, synchrotron and XFEL studies, coherent scattering, diffraction imaging, time-resolved studies and the structure of strain and defects in materials. The journal has two parts, a rapid-publication Advances section and the traditional Foundations section. Articles for the Advances section are of particularly high value and impact. They receive expedited treatment and may be highlighted by an accompanying scientific commentary article and a press release. Further details are given in the November 2013 Editorial. The central themes of the journal are, on the one hand, experimental and theoretical studies of the properties and arrangements of atoms, ions and molecules in condensed matter, periodic, quasiperiodic or amorphous, ideal or real, and, on the other, the theoretical and experimental aspects of the various methods to determine these properties and arrangements.
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