AUTOMATIC GENERATION OF FFT FOR TRANSLATIONS OF MULTIPOLE EXPANSIONS IN SPHERICAL HARMONICS.

Jakub Kurzak, Dragan Mirkovic, B Montgomery Pettitt, S Lennart Johnsson
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Abstract

The fast multipole method (FMM) is an efficient algorithm for calculating electrostatic interactions in molecular simulations and a promising alternative to Ewald summation methods. Translation of multipole expansion in spherical harmonics is the most important operation of the fast multipole method and the fast Fourier transform (FFT) acceleration of this operation is among the fastest methods of improving its performance. The technique relies on highly optimized implementation of fast Fourier transform routines for the desired expansion sizes, which need to incorporate the knowledge of symmetries and zero elements in the input arrays. Here a method is presented for automatic generation of such, highly optimized, routines.

球面谐波中多极展开平移的FFT自动生成。
快速多极法(FMM)是分子模拟中计算静电相互作用的一种有效算法,是替代埃瓦尔德求和法的一种很有前途的方法。球面谐波中多极展开的平移是快速多极方法中最重要的运算,快速傅里叶变换(FFT)加速是提高其性能的最快方法之一。该技术依赖于快速傅里叶变换程序的高度优化实现,以实现所需的扩展尺寸,这需要在输入数组中包含对称性和零元素的知识。本文提出了一种自动生成这种高度优化的例程的方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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