Conserved residues Glu37 and Trp229 play an essential role in protein folding of β-lactamase.

IF 5.5 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
FEBS Journal Pub Date : 2021-10-01 Epub Date: 2021-05-02 DOI:10.1111/febs.15854
Aleksandra Chikunova, Max P Manley, Misbha Ud Din Ahmad, Tuğçe Bilman, Anastassis Perrakis, Marcellus Ubbink
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引用次数: 6

Abstract

Evolutionary robustness requires that the number of highly conserved amino acid residues in proteins is minimized. In enzymes, such conservation is observed for catalytic residues but also for some residues in the second shell or even further from the active site. β-Lactamases evolve in response to changing antibiotic selection pressures and are thus expected to be evolutionarily robust, with a limited number of highly conserved amino acid residues. As part of the effort to understand the roles of conserved residues in class A β-lactamases, we investigate the reasons leading to the conservation of two amino acid residues in the β-lactamase BlaC, Glu37, and Trp229. Using site-directed mutagenesis, we have generated point mutations of these residues and observed a drastic decrease in the levels of soluble protein produced in Escherichia coli, thus abolishing completely the resistance of bacteria against β-lactam antibiotics. However, the purified proteins are structurally and kinetically very similar to the wild-type enzyme, only differing by exhibiting a slightly lower melting temperature. We conclude that conservation of Glu37 and Trp229 is solely caused by an essential role in the folding process, and we propose that during folding Glu37 primes the formation of the central β-sheet and Trp229 contributes to the hydrophobic collapse into a molten globule. ENZYME: EC 3.5.2.6. DATABASE: Structural data are available in PDB database under the accession number 7A5U.

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保守残基Glu37和Trp229在β-内酰胺酶的蛋白折叠中起重要作用。
进化稳健性要求蛋白质中高度保守的氨基酸残基的数量最小化。在酶中,这种保守性不仅适用于催化残基,也适用于第二壳层甚至更远的活性位点的某些残基。β-内酰胺酶随着不断变化的抗生素选择压力而进化,因此预计进化稳健,具有有限数量的高度保守的氨基酸残基。为了了解A类β-内酰胺酶中保守残基的作用,我们研究了导致β-内酰胺酶BlaC、Glu37和Trp229中两个氨基酸残基保守的原因。利用定点诱变技术,我们对这些残基产生了点突变,并观察到大肠杆菌中产生的可溶性蛋白水平急剧下降,从而完全消除了细菌对β-内酰胺类抗生素的耐药性。然而,纯化的蛋白质在结构和动力学上与野生型酶非常相似,只是表现出稍低的熔化温度。我们得出的结论是,Glu37和Trp229的保守性仅仅是由于它们在折叠过程中发挥了重要作用,我们提出在折叠过程中,Glu37启动了中心β-薄片的形成,而Trp229有助于疏水坍塌成熔融球。酶:ec 3.5.2.6。数据库:结构数据可在PDB数据库中获得,登录号为7A5U。
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来源期刊
FEBS Journal
FEBS Journal 生物-生化与分子生物学
CiteScore
11.70
自引率
1.90%
发文量
375
审稿时长
1 months
期刊介绍: The FEBS Journal is an international journal devoted to the rapid publication of full-length papers covering a wide range of topics in any area of the molecular life sciences. The criteria for acceptance are originality and high quality research, which will provide novel perspectives in a specific area of research, and will be of interest to our broad readership. The journal does not accept papers that describe the expression of specific genes and proteins or test the effect of a drug or reagent, without presenting any biological significance. Papers describing bioinformatics, modelling or structural studies of specific systems or molecules should include experimental data.
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