Is spatial distribution of the HIV-1-resistant CCR5Delta32 allele formed by ecological factors?

Oleg Balanovsky, Elvira Pocheshkhova, Andrey Pshenichnov, Daria Solovieva, Marina Kuznetsova, Olga Voronko, Michail Churnosov, Olga Tegako, Lubov Atramentova, Maria Lavryashina, Irina Evseeva, Svetlana Borinska, Margarita Boldyreva, Nadezhda Dubova, Elena Balanovska
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引用次数: 18

Abstract

It has been proposed that the Delta32 mutation in the chemokine receptor gene, inducing resistance to HIV-1 and, probably, to other virus infections, has undergone selection in historical times. The frequency of this mutant allele has changed rapidly both in time (during the last two millennia) and in space (across Eurasia). We compiled a global database on Delta32 allele frequencies in 300 populations. Nearly 10 percent of them are our data on 35 East European populations analyzed here for the first time. A detailed map of Delta32 frequency distribution was constructed and statistically analysed. We found a linearly decreasing trend with a maximum in areas surrounding the Baltic and White seas. Significant correlations with ground surface temperature were revealed. However, compared with our previous results, these correlations diminished, indicating that the influence of climate on Delta32 distribution was, if anything at all, indirect. The proposed scenario includes: i) arise and initial spread of the mutation among Uralic-speaking populations; ii) a frequency increase in northeastern Europe as a result of selection and/or genetic drift; iii) secondary spread (with selection continued) due to gene flow and the migrations of northern Europeans across the globe.

抗hiv -1 CCR5Delta32等位基因的空间分布是否由生态因素形成?
有人提出,趋化因子受体基因中的Delta32突变诱导了对HIV-1的抗性,也可能是对其他病毒感染的抗性,这一突变在历史上经历了选择。这种突变等位基因的频率在时间(过去两千年)和空间(欧亚大陆)上都发生了迅速的变化。我们编制了300个人群中Delta32等位基因频率的全球数据库。其中近10%是我们第一次分析的35个东欧人口的数据。构造了详细的Delta32频率分布图,并进行了统计分析。我们发现,波罗的海和白海周边地区呈线性下降趋势,下降幅度最大。与地表温度呈显著相关。然而,与我们之前的结果相比,这些相关性减弱了,表明气候对Delta32分布的影响,如果有的话,是间接的。提出的设想包括:i)突变在乌拉尔语人群中出现和最初传播;ii)由于选择和/或遗传漂变,在欧洲东北部出现频率增加;iii)由于基因流动和北欧人在全球范围内的迁徙而导致的二次传播(选择仍在继续)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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