A grid computing infrastructure for MEG data analysis.

S Nakagawa, T Kosaka, S Date, S Shimojo, M Tonoike
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Abstract

Magnetoencephalography (MEG) is widely used for studying brain functions, but clinical applications of MEG have been less prevalent. One reason is that only clinicians who have highly specialized knowledge can use MEG diagnostically, and such clinicians are found at only a few major hospitals. Another reason is that MEG data analysis is getting more and more complicated, and deals with a large amount of data, and thus requires high-performance computing. These problems can be solved by the collaboration of human and computing resources distributed in multiple facilities. A new computing infrastructure for brain scientists and clinicians in distant locations was therefore developed by the Grid technology, which provides virtual computing environments composed of geographically distributed computers and experimental devices. A prototype system connecting an MEG system at the AIST in Japan, a Grid environment composed of PC clusters at Osaka University in Japan and Nanyang Technological University in Singapore, and user terminals in Baltimore was developed. MEG data measured at the AIST were transferred in real-time through a 1-GB/s network to the PC clusters for processing by a wavelet cross-correlation method, and then monitored in Baltimore. The current system is the basic model for remote-access to MEG equipment and high-speed processing of MEG data.

用于MEG数据分析的网格计算基础结构。
脑磁图(MEG)被广泛用于脑功能的研究,但临床应用较少。一个原因是,只有具有高度专业知识的临床医生才能使用MEG进行诊断,而这样的临床医生只在少数几家大医院才有。另一个原因是MEG数据分析越来越复杂,处理的数据量很大,因此需要高性能的计算。这些问题可以通过分布在多个设施中的人力和计算资源的协作来解决。因此,网格技术为远程脑科学家和临床医生开发了一种新的计算基础设施,它提供了由地理分布的计算机和实验设备组成的虚拟计算环境。开发了连接日本AIST的MEG系统、日本大阪大学和新加坡南洋理工大学PC集群组成的网格环境以及巴尔的摩用户终端的原型系统。在AIST测量的MEG数据通过1gb /s的网络实时传输到PC集群,并通过小波互相关方法进行处理,然后在巴尔的摩进行监测。目前的系统是远程接入MEG设备和高速处理MEG数据的基本模型。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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