Unnatural base pairs between 2-amino-6-(2-thienyl)purine and the complementary bases.

I Hirao, T Fujiwara, M Kimoto, T Mitsui, T Okuni, T Ohtsuki, S Yokoyama
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引用次数: 3

Abstract

The unnatural base, 2-amino-6-(2-thienyl)purine (designated as s), instead of 2-amino-6-(N,N-dimethylamino)purine (designated as x), was designed in order to improve the specificity and efficiency of the base pairing with pyridin-2-one (designated as y). DNA fragments containing s were chemically synthesized, and the thermal stability and the enzymatic reactions involving the s-y pairing were examined. Thermal denaturation experiments showed that the DNA duplex (12-mer) containing the s-y pair was more stable than that containing the x-y pair. The incorporation of dyTP was also more advantageous to the s-y pairing than the x-y pairing in single-nucleotide insertion experiments using the Klenow fragment of Escherichia coli DNA polymerase I.

2-氨基-6-(2-噻吩基)嘌呤与互补碱基之间的非自然碱基对。
设计非天然碱基2-氨基-6-(N,N-二甲氨基)嘌呤(x)代替2-氨基-6-(N,N-二甲氨基)嘌呤(s),以提高与吡啶-2- 1 (y)碱基配对的特异性和效率。化学合成了含有s的DNA片段,并对s-y配对的热稳定性和酶促反应进行了研究。热变性实验表明,含有s-y对的DNA双链(12-mer)比含有x-y对的DNA双链更稳定。在利用大肠杆菌DNA聚合酶I的Klenow片段进行的单核苷酸插入实验中,dyTP的掺入也比x-y配对更有利于s-y配对。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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