A Lamour, F van den Bosch, A J Termorshuizen, M J Jeger
{"title":"Quasi-steady state approximation to a fungal growth model.","authors":"A Lamour, F van den Bosch, A J Termorshuizen, M J Jeger","doi":"","DOIUrl":null,"url":null,"abstract":"<p><p>In a previous paper, we proposed a fungal growth model (Lamour et al., 2001 IMA J. Math. Appl. Med. Biol., 17, 329-346), describing the colonization and decomposition of substrate, subsequent uptake of nutrients, and incorporation into fungal biomass, and performed an overall-steady-state analysis. In this paper we assume that where nutrient dynamics are much faster than the dynamics of fungal biomass and substrate, the system will reach a quasi-steady-state relatively quickly. We show how the quasi-steady-state approximation is a simplification of the full fungal growth model. We then derive an explicit fungal invasion criterion, which was not possible for the full model, and characterize parameter domains for invasion and extinction. Importantly, the fungal invasion criterion takes two forms: one for systems where carbon is limiting, another for systems where nitrogen is limiting. We focus attention on what happens in the short term immediately following the introduction of a fungus to a fungal-free system by analysing the stability of the trivial steady state, and then check numerically whether the fungus is able to persist. The derived invasion criterion was found to be valid also for the full model. Knowledge of the factors that determine invasion is essential to an understanding of fungal dynamics. The simplified model allows the invasion criterion to be tested with experimental data.</p>","PeriodicalId":77168,"journal":{"name":"IMA journal of mathematics applied in medicine and biology","volume":"19 3","pages":"163-83"},"PeriodicalIF":0.0000,"publicationDate":"2002-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"IMA journal of mathematics applied in medicine and biology","FirstCategoryId":"1085","ListUrlMain":"","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
In a previous paper, we proposed a fungal growth model (Lamour et al., 2001 IMA J. Math. Appl. Med. Biol., 17, 329-346), describing the colonization and decomposition of substrate, subsequent uptake of nutrients, and incorporation into fungal biomass, and performed an overall-steady-state analysis. In this paper we assume that where nutrient dynamics are much faster than the dynamics of fungal biomass and substrate, the system will reach a quasi-steady-state relatively quickly. We show how the quasi-steady-state approximation is a simplification of the full fungal growth model. We then derive an explicit fungal invasion criterion, which was not possible for the full model, and characterize parameter domains for invasion and extinction. Importantly, the fungal invasion criterion takes two forms: one for systems where carbon is limiting, another for systems where nitrogen is limiting. We focus attention on what happens in the short term immediately following the introduction of a fungus to a fungal-free system by analysing the stability of the trivial steady state, and then check numerically whether the fungus is able to persist. The derived invasion criterion was found to be valid also for the full model. Knowledge of the factors that determine invasion is essential to an understanding of fungal dynamics. The simplified model allows the invasion criterion to be tested with experimental data.
在之前的论文中,我们提出了一种真菌生长模型(Lamour et al., 2001 IMA J. Math)。达成。地中海,杂志。, 17, 329-346),描述了底物的定植和分解,随后的营养吸收,以及融入真菌生物量,并进行了总体稳态分析。在本文中,我们假设养分动态比真菌生物量和底物的动态快得多,系统将相对较快地达到准稳态。我们展示了准稳态近似是如何简化完整的真菌生长模型。然后,我们推导出一个明确的真菌入侵标准,这是不可能的完整模型,并表征参数域的入侵和灭绝。重要的是,真菌入侵标准有两种形式:一种用于碳限制的系统,另一种用于氮限制的系统。通过分析平凡稳态的稳定性,我们将注意力集中在将真菌引入无真菌系统后的短期内发生的情况,然后通过数值检查真菌是否能够持续存在。推导出的入侵准则对整个模型也是有效的。了解决定入侵的因素对于理解真菌动力学是必不可少的。简化后的模型可以用实验数据验证入侵判据。