Genomic diversity of the genus Stenotrophomonas.

L Hauben, L Vauterin, E R Moore, B Hoste, J Swings
{"title":"Genomic diversity of the genus Stenotrophomonas.","authors":"L Hauben,&nbsp;L Vauterin,&nbsp;E R Moore,&nbsp;B Hoste,&nbsp;J Swings","doi":"10.1099/00207713-49-4-1749","DOIUrl":null,"url":null,"abstract":"<p><p>The clinical and environmental importance of Stenotrophomonas bacteria requires thorough, molecular studies on their epidemiology and taxonomy. In order to obtain a complete genomic profile of this genus, over 100 Stenotrophomonas maltophilia strains from various origins were investigated by AFLP fingerprinting. A subset of these strains was analysed by DNA hybridization and 16S rDNA sequencing. In contrast to their high phenotypic homogeneity, the strains were found to be very heterogeneous genotypically by AFLP fingerprinting. Nevertheless, ten cores of highly similar strains representing ten genomic groups were observed. The same groups could be retrieved by DNA hybridizations and also, partly, by 16S rDNA sequence analysis. The intergroup DNA similarities were too high to create confident species delineations, neither could the genomic groups be characterized by phenotypic features.</p>","PeriodicalId":14428,"journal":{"name":"International journal of systematic bacteriology","volume":"49 Pt 4 ","pages":"1749-60"},"PeriodicalIF":0.0000,"publicationDate":"1999-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1099/00207713-49-4-1749","citationCount":"157","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International journal of systematic bacteriology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1099/00207713-49-4-1749","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 157

Abstract

The clinical and environmental importance of Stenotrophomonas bacteria requires thorough, molecular studies on their epidemiology and taxonomy. In order to obtain a complete genomic profile of this genus, over 100 Stenotrophomonas maltophilia strains from various origins were investigated by AFLP fingerprinting. A subset of these strains was analysed by DNA hybridization and 16S rDNA sequencing. In contrast to their high phenotypic homogeneity, the strains were found to be very heterogeneous genotypically by AFLP fingerprinting. Nevertheless, ten cores of highly similar strains representing ten genomic groups were observed. The same groups could be retrieved by DNA hybridizations and also, partly, by 16S rDNA sequence analysis. The intergroup DNA similarities were too high to create confident species delineations, neither could the genomic groups be characterized by phenotypic features.

窄食单胞菌属的基因组多样性。
窄养单胞菌的临床和环境重要性需要对其流行病学和分类进行彻底的分子研究。为了获得该属的完整基因组图谱,对来自不同来源的100多株嗜麦芽窄养单胞菌进行了AFLP指纹图谱研究。通过DNA杂交和16S rDNA测序对这些菌株进行了分析。与它们的高表型同质性相反,AFLP指纹图谱发现菌株的基因特征非常异质性。然而,十个核心高度相似的菌株代表十个基因组组被观察到。通过DNA杂交和部分16S rDNA序列分析,可以检索到相同的群体。组间DNA相似性太高,无法建立自信的物种描述,也无法通过表型特征来表征基因组组。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信