Femtosecond Three-Dimensional Imaging of Single-Protein with Hard X-ray Laser.

ArXiv Pub Date : 2026-10-11
Paul Lourdu Xavier, Andrew J Morgan, Johan Bielecki, Amit K Samanta, Simon Dold, Chufeng Li, Xinyue Gao, Spencer K Passmore, Ruslan P Kurta, Tim B Berberich, Emiliano De Santis, Wenhui Zhang, Juncheng E, Faisal H M Koua, Romain Letrun, Luca Gelisio, Oleksii Turkot, Egor Sobolev, Lukas V Haas, Jannik Lübke, Jingxuan He, Madeline B F Memovich, Kevin Janson, Stefanie Lenzen, Safi Rafie-Zinedine, Mansi Butola, Oleksandr Yefanov, Fabian Trost, Chan Kim, Tomas Popelar, Tokushi Sato, Yevheniy Ovcharenko, Rebecca Boll, Sergey Usenko, Thomas M Baumann, Alberto De Fanis, Björn Senftleben, Matteo Porro, Andrea Castoldi, Ibrahym Dourki, Cyril Danilevski, Ekaterina Round, Christina Schmidt, Huijong Han, Roberto Alvarez, Ervin Chia, Cornelia Cazey, Carolin Seuring, Ruojie Sha, Maia Azubel, David A Bushnell, Sébastien Boutet, Sergey Ovchinnikov, Adrian P Mancuso, Michael Meyer, Richard Bean, Anton Barty, Filipe R N C Maia, Richard A Kirian, Thomas D Grant, N Duane Loh, Carl Caleman, Erik G Marklund, Nadia Zatsepin, Andrew V Martin, Saša Bajt, Roger D Kornberg, Jochen Küpper, Henry N Chapman
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引用次数: 0

Abstract

The extremely intense pulses of X-ray free-electron lasers (XFELs) have enabled imaging of radiation-sensitive samples, such as macromolecular microcrystals, beyond radiation damage limits. These sources have the potential to deliver biomolecular single-particle imaging, similar to cryo-electron microscopy but without the need for cryo-fixation and with temporal resolution from femtoseconds to milliseconds. While this possibility was recognized before XFELs were built, the biological single-particle imaging work-flow has previously only been demonstrated on large virus particles. Based on decades of improvements in X-ray beam focusing, particle delivery, diffraction detection, and advanced analysis, here we demonstrate imaging of a single molecular complex, the giant-hemoglobin erythrocruorin (Ery) with X-ray laser pulses. Two-dimensional classes of diffraction patterns could be reconstructed to 15 Angstrom resolution, and 3D images to approximately 20 Angstrom, while the 3D merged intensity in reciprocal space extended beyond 20 Angstrom. The resolution discrepancy is likely due to heterogeneity caused by gas-phase compaction of the complexes. With increased throughput, this approach could be used to reveal in-situ structural details during mass spectrometry studies of biomolecules, while improvements in sample delivery may provide ultrafast snapshot imaging of biological single-particles in their native-state beyond the limitations of radiation damage.

硬x射线激光单蛋白飞秒三维成像。
x射线自由电子激光器(XFELs)的极强脉冲使辐射敏感样品(如大分子微晶体)的成像能够超越辐射损伤极限。这些光源具有提供生物分子单粒子成像的潜力,类似于冷冻电子显微镜,但不需要冷冻固定,时间分辨率从飞秒到毫秒不等。虽然在构建XFELs之前就认识到这种可能性,但生物单颗粒成像工作流程以前仅在大病毒颗粒上得到证实。基于几十年来在x射线聚焦、粒子传递、衍射检测和高级分析方面的改进,我们在这里展示了x射线激光脉冲对单个分子复合物巨血红蛋白(Ery)的成像。二维衍射图可以重构到15埃的分辨率,三维图像可以重构到大约20埃的分辨率,而在倒易空间的三维合并强度扩展到20埃以上。分辨率差异可能是由于配合物的气相压实引起的非均质性。随着通量的增加,该方法可用于在生物分子的质谱研究中揭示原位结构细节,而样品传递的改进可能提供超越辐射损伤限制的天然状态下生物单粒子的超快快照成像。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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