Artificial intelligence - driven toxicogenomics for predictive environmental and pharmaceutical safety.

IF 3 3区 生物学 Q2 GENETICS & HEREDITY
Frontiers in Genetics Pub Date : 2026-10-08 eCollection Date: 2026-01-01 DOI:10.3389/fgene.2026.1858338
Mohammed Monirul Islam, Sibghatullah Muhammad Ali Sangi, Girish Meravanige, Sreeharsha Nagaraja, Muhammad Shahzad Chohan, Md Khalid Anwer, Ashesh Gurung
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引用次数: 0

Abstract

Toxicogenomics integrates high-throughput genomic technologies with toxicology to evaluate molecular responses to chemical and pharmaceutical exposures. The increasing volume and complexity of multi-omics data necessitate advanced computational approaches capable of extracting meaningful and predictive insights. In this context, artificial intelligence (AI) and machine learning (ML) techniques-including support vector machines, random forests, and deep learning architectures-are increasingly employed for early toxicity prediction and risk assessment, with reported improvements in predictive accuracy and sensitivity relative to conventional toxicological approaches. This paper explores the role of AI-driven toxicogenomics in enhancing predictive environmental and pharmaceutical safety. It highlights the application of ML-based and data-driven models for the integrative analysis of transcriptomic, proteomic, and metabolomic datasets to identify toxicity-associated biomarkers, elucidate mechanisms of action, and predict adverse drug and environmental effects prior to clinical manifestation. Notably, AI-driven models have demonstrated significant improvements in prediction accuracy, sensitivity, and scalability compared to traditional toxicological approaches, reducing reliance on animal testing and accelerating decision-making processes. Furthermore, the paper discusses the significance of AI-based toxicogenomics in drug development, environmental contaminant screening, and regulatory toxicology, while addressing key challenges such as data heterogeneity, model interpretability, and regulatory acceptance. The convergence of computer science and toxicogenomics represents a robust framework for next-generation predictive toxicology, facilitating safer pharmaceutical development, more precise environmental risk assessment, and evidence-based public health and regulatory decision-making.

人工智能驱动的毒物基因组学预测环境和药物安全。
毒物基因组学将高通量基因组技术与毒理学相结合,以评估化学和药物暴露的分子反应。多组学数据的数量和复杂性不断增加,需要能够提取有意义和预测性见解的先进计算方法。在这种情况下,人工智能(AI)和机器学习(ML)技术——包括支持向量机、随机森林和深度学习架构——越来越多地用于早期毒性预测和风险评估,据报道,与传统毒理学方法相比,预测的准确性和灵敏度都有所提高。本文探讨了人工智能驱动的毒物基因组学在提高预测性环境和药物安全性方面的作用。它强调了基于ml和数据驱动模型的应用,用于转录组学、蛋白质组学和代谢组学数据集的综合分析,以识别毒性相关的生物标志物,阐明作用机制,并在临床表现之前预测药物和环境的不良影响。值得注意的是,与传统毒理学方法相比,人工智能驱动的模型在预测准确性、灵敏度和可扩展性方面都有显著提高,减少了对动物试验的依赖,加快了决策过程。此外,本文还讨论了基于人工智能的毒物基因组学在药物开发、环境污染物筛选和监管毒理学方面的重要性,同时解决了数据异质性、模型可解释性和监管接受等关键挑战。计算机科学和毒物基因组学的融合代表了下一代预测毒理学的强大框架,促进了更安全的药物开发,更精确的环境风险评估,以及基于证据的公共卫生和监管决策。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Frontiers in Genetics
Frontiers in Genetics Biochemistry, Genetics and Molecular Biology-Molecular Medicine
CiteScore
5.50
自引率
8.10%
发文量
3491
审稿时长
14 weeks
期刊介绍: Frontiers in Genetics publishes rigorously peer-reviewed research on genes and genomes relating to all the domains of life, from humans to plants to livestock and other model organisms. Led by an outstanding Editorial Board of the world’s leading experts, this multidisciplinary, open-access journal is at the forefront of communicating cutting-edge research to researchers, academics, clinicians, policy makers and the public. The study of inheritance and the impact of the genome on various biological processes is well documented. However, the majority of discoveries are still to come. A new era is seeing major developments in the function and variability of the genome, the use of genetic and genomic tools and the analysis of the genetic basis of various biological phenomena.
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